Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g2780 ATGGCTTCAGTAACACTGCAAACGACGTCGTCGAGATTGGTCTCTTTACCGAACGCTTCGGTGGTGAAGGTTTCGATTCCTACGAAGAGAACGCTGATCAATTTTCGGTCCAATGGTTCCATTTCAAGCTTGACGAATAACATAACAACTCACGCCGTTTCCCGCAATGGCTCCATTTCTAGCTGCGCCTCCAACATGTCTGTGTCAAGTTTGAAGGCAGATGAGAACAGACGCAAGAGTAATCTTGAATCTCTCTTTTGCTATGATAAGGCCATCCCAGAAGAAATAATTGAGAAGCCTGTTGGACTATCTTTGACTGAGAAAGATATCGGTAACAATCCCCGATGCACTGATTGCGAAGCTAAAGGTGCTGTGCTTTGCATCACTTGTGCTGGTTCTGGCCTATATGTTGACTCCATATTGGAAAGCCAGGGCATAATTGTCAAAGTTCGTTGCTTAGGTATGTTCTGGTGCAAACATAGATATCTCATATGCTGCCGAATTTCTTTTCCATACACCTCGTGTTCAACCGTTGCTGCATCTTGTAGTTTTCTTATTAAGATAAATAAAAGCATTTTCTTGATGGATCTACTTGATCTTATGGATGGCTAA 612 0.4265 MASVTLQTTSSRLVSLPNASVVKVSIPTKRTLINFRSNGSISSLTNNITTHAVSRNGSISSCASNMSVSSLKADENRRKSNLESLFCYDKAIPEEIIEKPVGLSLTEKDIGNNPRCTDCEAKGAVLCITCAGSGLYVDSILESQGIIVKVRCLGMFWCKHRYLICCRISFPYTSCSTVAASCSFLIKINKSIFLMDLLDLMDG* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g2780 203 PANTHER DNAJ/HSP40 CYSTEINE-RICH DOMAIN SUPERFAMILY PROTEIN 26 165 - -
Amo16g2780 203 PANTHER PLASTID TRANSCRIPTIONALLY ACTIVE PROTEIN 26 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g2780 Amo-Chr16 123834887 123836804 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g2780 - - gmx:100306113 213.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g2780 16 123834887 123836804 Amo06g2100 06 76343316 76345942 hybridization