Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2100 ATGGCTTCAGTAACACTGCAAACGACGTCGTCGAGATTGGTCCCTTTGCCGAACGCTTCGGTGGTGAAGGTTTCGATTCCTACGAAGAGAACGCTGATCAATTTTCGGTCCAATGGTTCCATTTCAAGCTTGACGAATAACATAACAACTCACGCCGTTTCCCGCAATGGCTCCATTTCTAGCTGCGCCTCCAACATGTCTGTGTCAAGTTTGAAGGCAGATGAGAACAGACGCAAGAGTAATCTTGAATCTCTCTTTTGCTATGATAAGGCCATCCCAGAAGAAATAATTGAGAAGCCTGTTGGACTATCTTTGACTGAGAAAGATATCGGTAACAATCTCCGATGCACTGATTGCGAAGCTAAAGGTGCTGTGCTTTGCATCACTTGTGCTGGTTCTGGCCTATACGTTGACTCCATATTGGAAAGCCAGGGCATAATTGTCAAAGTTCGTTGCTTAGGTTGTGGAGGAACAGGTAATATGATGTGTACGGAATGCGGGGGACGGGGTCATCTGGGACCAAAATGA 528 0.4621 MASVTLQTTSSRLVPLPNASVVKVSIPTKRTLINFRSNGSISSLTNNITTHAVSRNGSISSCASNMSVSSLKADENRRKSNLESLFCYDKAIPEEIIEKPVGLSLTEKDIGNNLRCTDCEAKGAVLCITCAGSGLYVDSILESQGIIVKVRCLGCGGTGNMMCTECGGRGHLGPK* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2100 175 PANTHER DNAJ/HSP40 CYSTEINE-RICH DOMAIN SUPERFAMILY PROTEIN 27 170 - -
Amo06g2100 175 PANTHER PLASTID TRANSCRIPTIONALLY ACTIVE PROTEIN 27 170 - -
Amo06g2100 175 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 109 172 IPR036410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2100 Amo-Chr6 76343316 76345942 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2100 - - gmx:100306113 259.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g2780 16 123834887 123836804 Amo06g2100 06 76343316 76345942 hybridization