Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g2779 ATGTCATTGAGAATCATCTTTCAGATCCTTTTCTACTTGCATTTGCTCCTAACAGCAGCCACAGTGATCTTCATCACTGTTTATGGCCTGACCACGGAATCTGGCGGCCAACATTTCCACCCTTTGAAGTGGTACCCTCCAGTTCTAGCTTCGACGGCATGTGGCGGAATAATCGGTTTCATGTGGCAATGGATCACTTTCAGCTACCCAAGAAACGCACTCAAGGCAGCATTTTGGCTAGGTCCCCTGCTAACATGCTTAATGGCTGGGATGTTTGTGTACATGGGCACAGCAACTAGTCTTATAGTGGGATTAGTTTCTTTCTGTTCTGCATTAGCTCAATCCCTCTATGGTTGTTGGGTCAGCCACAGATTCGAATACGCGACGAATATCTTGTCAGTTTCAACAGCTTTTCCACCTGCTAAAACCAGAGTGTTGGTACTCGCGACAATTGTAATTGGAACCCTTTATTGCTGTTTTCTTGTATCCGGGATCGGTGGAGCTACAGCCCTTCAAGACAAATTCAAATTGGCTTTCATTTTCATCTTGGTGATTATGCTGAGCCTGGGATGGACCATGCAGTTTCTCAAGAATGTAATACAACTCACCATTTCAAGGGTCACATATCTGCAGATACTTGGAAATCACATGGATACTTGTGCGGCGCTTCGTGACAGTATCAATCGTTCTGGTGGATGTATCGCCATTGGCTCAATCCTTCTCCCAGTCTTCACTCTCTTCCGCGGTTTTGGACGCTCGATGAGTCTACTTGGAGGAGAAGATGAGATCCTGTTTTGCTGTGTTATGGTGCTGGTAAACGTTCTTCCGCAGTTTGTGAACCGATGGAGTTTTGTACATATTGGAGCCTATAACAAAGAGTTTGTGCACGCATCTCGAGATACTTGGGAAATGTTCAATAGCTCTAGAATGTTGCCACTCATAGACTCGGATCTAACCGGAGCATTATGTTTCCTTAGCGGAGTAGCTGTAGGTGCATTTTGTTCTATGGTGTGTGGAATTTGGATCCTTGTGATGCATCAGAGCTATGCCCTGGAAGTATCCATTTATGCTTTCTTGATTGGCTATTTCATGCATAGCCATTTCATTGTAACTGGCTATCGTGTATCACCTCGAATACACCACAGAGATCATCGAAGTAGAAGAAGGTCAACAACAACACAAGCTTCCTCCATAAAAGGCACAAGATTTGGAAACACAACAAAAATGTCATTGAGAATCATCTTTCAGATCCTTTTCTACTTGCATTTGCTCCTAACAGCAGCCACAGTGATCTTCATCACTGTTTATGGCCTGACCSCGGAATCTGGCGGCCAYCATTTCCACCCTSTGAAGTGGTACCCTCCAGTTCTAGCTTCGACGGCATGTGGCGGAATAATCGGTTTCATGTGGCAATGGATCACTTTCAGCTACCCAAGAAACGCACTCAAGGCAGCATTTTGGCTAGGTCCCCTGCTAACATGTTTAATGGCTGGGATGTTTGTGTACATGGGCACAGCAACTAGTCTTATAGTGGGATTAGTTTCCTTCTGTTCTGCATTAGCTCAATCCCTCTATGGTTGTTGGGCCAGACCCAGATTCGAATATGCGACGAATATCTTGTCAGTTTCAACAGCTTTTCCACCTGCTAAAACCAGAGTGTTGGTACTCGCGACAATTGTAATTGGAACCCTTTATTGCTGTTTTCTTGTATCCGGGATCGGTGGAGCTACAGCCCTTCAAGACAAATTCAAATTGGCTTTCATTTTCATCTTGGTGATTATGCTGAGCCTGGGATGGACCATGCAGTTTCTCAAGAATGTAATACAACTCACCATTTCAAGGGTCACATATCTGCAGATACTTGGAAATCCCATGGATACTTATGAGGCGCTTCGTGACAGTATCAATCGTTCTGTTGGATGTATCGCCATTGGCTCAATCCTTCTCCCAGTCTTCACTCTCTTCCGCGGTTTTGGACGCTCGATGAGTCTACTTGGAGGAGAAGATGAGATCCTGTTTTGCTGTGTTAGTTCTTATATGGGGATGGTAAACGTTCTTCCGAAGTTTGGGAACCGATGGAGTTTTGTACATATTGGAGTCTATAACAAAGAGTTTGTGGACGCATCTGGTGATATTTGGGAAATATTCACTAGAGCTAGAATGTTGCCACTCATAGACTCGGATCTAACCGGAGCATTATGTTTCCTTAGCGGAGTAGCTGTAGGTGCATTTTGTTCTATGGTGTGTGGAATTTGGATCCTTGTGATGCATCAGAGCTATGCCCTGGAAGTATCCATTTATGCTTTCTTGATTGGCTATTTCATGTGTCGATTGGCAATGGGGTGGCTACAGGCATGTGTTGCGGCATACTATGTTGCCTACGGAGAGAATCCGGAGAACGATCAATTCGACTCAACAATTCCAGCACGCTTGGAGCAGATTCAAAGATCTCAAGCTCTGCAACTATTCTGA 2472 0.4458 MSLRIIFQILFYLHLLLTAATVIFITVYGLTTESGGQHFHPLKWYPPVLASTACGGIIGFMWQWITFSYPRNALKAAFWLGPLLTCLMAGMFVYMGTATSLIVGLVSFCSALAQSLYGCWVSHRFEYATNILSVSTAFPPAKTRVLVLATIVIGTLYCCFLVSGIGGATALQDKFKLAFIFILVIMLSLGWTMQFLKNVIQLTISRVTYLQILGNHMDTCAALRDSINRSGGCIAIGSILLPVFTLFRGFGRSMSLLGGEDEILFCCVMVLVNVLPQFVNRWSFVHIGAYNKEFVHASRDTWEMFNSSRMLPLIDSDLTGALCFLSGVAVGAFCSMVCGIWILVMHQSYALEVSIYAFLIGYFMHSHFIVTGYRVSPRIHHRDHRSRRRSTTTQASSIKGTRFGNTTKMSLRIIFQILFYLHLLLTAATVIFITVYGLTXESGGHHFHPXKWYPPVLASTACGGIIGFMWQWITFSYPRNALKAAFWLGPLLTCLMAGMFVYMGTATSLIVGLVSFCSALAQSLYGCWARPRFEYATNILSVSTAFPPAKTRVLVLATIVIGTLYCCFLVSGIGGATALQDKFKLAFIFILVIMLSLGWTMQFLKNVIQLTISRVTYLQILGNPMDTYEALRDSINRSVGCIAIGSILLPVFTLFRGFGRSMSLLGGEDEILFCCVSSYMGMVNVLPKFGNRWSFVHIGVYNKEFVDASGDIWEIFTRARMLPLIDSDLTGALCFLSGVAVGAFCSMVCGIWILVMHQSYALEVSIYAFLIGYFMCRLAMGWLQACVAAYYVAYGENPENDQFDSTIPARLEQIQRSQALQLF* 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g2779 823 PANTHER F20H23.27 PROTEIN-RELATED 398 818 - -
Amo16g2779 823 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 4 365 IPR007603 GO:0022857|GO:0055085
Amo16g2779 823 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 398 818 IPR007603 GO:0022857|GO:0055085
Amo16g2779 823 Pfam Plasma-membrane choline transporter 515 799 IPR007603 GO:0022857|GO:0055085
Amo16g2779 823 Pfam Plasma-membrane choline transporter 108 369 IPR007603 GO:0022857|GO:0055085
Amo16g2779 823 PANTHER F20H23.27 PROTEIN-RELATED 4 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g2779 Amo-Chr16 123824416 123833898 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g2779 - - aip:107648347 836.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g2779 16 123824416 123833898 Amo06g2099 06 76341792 76343124 hybridization