Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2099 ATGTCATTGAGAATCATCTTTCAGATCCTTTTCTACTTGCATTTGCTCCTAACAGCAGCCACAGTGATCTTCATCACTGTTTATGGCCTGACCTCGGAATCTGGCGGCCAACATTTCCACCCTTTGAAGTGGTACCCTCCAGTTCTAGCTTCGACGGCATGTGGCGGAGTAATCAGTTTCCTGTGGCAATGGATCACTTTCAGCTACCCAAGAAACGCACTCAAGGCAGCATTTTGGCTAGGTCCGTTGCTAACATGTTTAATGGCTGGGATGTTTGTGTACATAGGCACTGCAACTAGTCTTATAGTGGGATTAGTTTCTTTCTGTTCTGCATTAGCTCAATCCCTCTATGGTTGTTGGGTCAGACCCAGATTCGAATACGCGACGAATATCTTGTCAGTTTCAACAGCTTTTCCACCTGCTAAAACCAGAGTGTCGGTACTCGCGACAATTGTAATTGGAACCCTTTATTGCTGTTTTCTTGTATCCGGGATCGGTGGAGCTACAGCCCTTCAAGACAAATTCAAATTAGCTTTCATTTTCATCTTGGTGATTATGCTGAGCCTGGGATGGACCATGCAGTTTCTCAAGAATGTAATACAACTCACCATTTCAAGGGTCACATATCTGCAGATACTTGGAAACCCCATGGATACTTGTGCCGCGCTTCGTGACAGTATCAATCGTTCTGTTGGATGTATCGCCATTGGCTCAATCCTTATCCCGGTCTTCACTCTCCTCCGCAGTTTTGGACGCTCCATGAGTCTACTTGGAGGAGAAAATGAGATCATGTTTTGCTGTGTTAGTTATTGTATGGGGATGGTAAACGTTCTTCCGAAGTTTGGGAGCCGATGGAGTTTTGTACATATTGGAGTCTATAACAAAGAGTTTGTGGACGCATCTCAAGATACTTGGGAAATCTTCACTGGAGCTAGAATGTTGCCACTCATAGACTCGGATCTAACCGGAGCATTATGTTTCCTTAGCGGAGTAGCTGTAGGTGCATTTTGTTCTATGGTGAGTGGAATTTGGATCCTTGTGATGCATCAGAGCTATGCCCTGGAAGTATCCATTTATGCTTTCTTGATTGGCTATTTCATGTGTCGATTGGCAATGGGGTGGCTACAGGCATGTGTTGCGGCATACTATGTTGCCTACGGAGAGAATCCAGTGAACGATCAATTCGACTCAACAATTCCAGCACGCTTGGAGCAGATTCAAAGATCTCAGGCTCTGTAA 1239 0.4496 MSLRIIFQILFYLHLLLTAATVIFITVYGLTSESGGQHFHPLKWYPPVLASTACGGVISFLWQWITFSYPRNALKAAFWLGPLLTCLMAGMFVYIGTATSLIVGLVSFCSALAQSLYGCWVRPRFEYATNILSVSTAFPPAKTRVSVLATIVIGTLYCCFLVSGIGGATALQDKFKLAFIFILVIMLSLGWTMQFLKNVIQLTISRVTYLQILGNPMDTCAALRDSINRSVGCIAIGSILIPVFTLLRSFGRSMSLLGGENEIMFCCVSYCMGMVNVLPKFGSRWSFVHIGVYNKEFVDASQDTWEIFTGARMLPLIDSDLTGALCFLSGVAVGAFCSMVSGIWILVMHQSYALEVSIYAFLIGYFMCRLAMGWLQACVAAYYVAYGENPVNDQFDSTIPARLEQIQRSQAL* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2099 412 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 4 410 IPR007603 GO:0022857|GO:0055085
Amo06g2099 412 PANTHER F20H23.27 PROTEIN-RELATED 4 410 - -
Amo06g2099 412 Pfam Plasma-membrane choline transporter 107 390 IPR007603 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2099 Amo-Chr6 76341792 76343124 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2099 - - aip:107648347 790.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g2779 16 123824416 123833898 Amo06g2099 06 76341792 76343124 hybridization