Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g2667 ATGACACAATCGAACACTCACAGTAGAGTTTCTCAAATTGGGATAAGATCTTCAAACATTATGACTTCACTTTTTAAAATCACCTACATCTTTTTTCTACTTTCTTTGCTAGCATTGTGTTTTCTATCTAATGCCAATGCTAGAGTTAATCATACATCAACGTTAGTTGTTGATGGATCCAAGGGTTCTGGAAGACAAATTCCAGATACATTCTTTGGAGCATTCTTTGAAGAAATTAATCATGCTGGGGCAGGAGGACTTTGGGCAGAAATGGTTAGAAACAGAGGGTTTGAAGCCGGAGGTGCAAATGTTCCATCAAATATTTATCCATGGACAATTATTGGAGATGAATCATCCATTCTTGTGTCAACTGATCGCACTTCTTGCTTTGAAAGAAACAAGATTGCACTTCGTATGGAAGTTCTTTGCAATGCCAAGTCATGCCCTAACAATGGTGTTGGAATCTCTAACTCTGGATTCTGGGGCATGAACATTGAGGAAGGGAAGAAGTATAGAGTTATCTTCTATGCTAGGGCACTTGGAGTTGGACCACTTGATCTAAAGGTCTCGTTAGTGGGAGATGATGGTGTCAGTGTTGCTTCAACTCAAGTCGGAGGGTATGGAAGTTATGCTTATAAGTGGAGGAGAATGGAGACAACATTGGAAGCCAATGCTACAAATCATAATTCAAGCCTTCAAATTACCACAAATCATAGAGGTGTTATATGGCTAGACCAAGTCTCAGCTATGCCCTTAGACACACACAAGGGTCATGGTTTTAGAAAGGACCTGTTTCAGATGGTTGCAAATTTAAAGCCAAAATTTTTCAGATTTCCGGGTGGTTGCTATGTGGAAGGAGGTTATCTAAGAAATGCATTCCGTTGGAAAGACAGTGTTGGAGCATGGGAGGAGAGAGCTGGTCACTTTAATGATGTTTGGCATTATTGGACTGATGATGGTTTTGGTTTCTTTGAGGGTCTCCAGTTTGCAGAGGACGTTGGTGCATTGCCAGTATGGGTATTTAACAATGGTATCGGCCTTCATGACGCCGTGGATACATCTGCGGTTCTACCATTTGTGCAAGAAGCCCTTGATGGCATTGAGTTTGCAAGAGGCTCTCCCGATTCAACTTGGGGTTCTGTTAGAGCTTCAATGGGGCATCCTCAACCATTTGATTTGAGATTTGTTGCCATTGGAAATGAAGAATGTGGCATGCCAAACTATCTAGGAAATTACCTGAAGTTCTATGCAGCGATAAAGCGTTCTTATCCAGATATTCAGATTATCACAAACTGTGATGGTTCTGGGCAGAACTTAGACATGCCTGCAGATTTCTATGATTTTCATATTTACACAAACGCTGAAGATATGTTTTATAAGAATACCAAGTTTGATGCTGCACCACGATCTGGACCAAAGGCATTTGTAAGTGAATACGCTGTTTGGAAGGATGATGCCCGCGATGGAACACTTTTATCTGCAGTGGCTGAAGCTGCATTCCTTATTGGATTGGAGAGGAACAGTGATCTTGTGCACATGGTTAGCTATGCACCACTTTTTGTCAATAACAACGACAGGATGTGGAGCCCAGATGCAATTGTGTTTAACTCGCATCAACTTTATGGAACTCCAAGCTATTGGAATCAACAACTATTTTCCGAATCTAGTGGAGCAACTTGGCTCAATTCAACGCTTCAAACTTCTTCCACTAAACTCGTAGCATCTGCAATTGAGTTTAATAATACTGAAGATAATAAGACATATATTAGAATAAAGGCTGTGAACTTTGGAGATGACCCCGAGAATCTGAAGATTTCAATAAATGGGTTGACTTCAAATGTTCAACAATCTGGATCGAAAATGATGGTGCTCACAGCACCTAATGTAATGGAAGAGAATTCTTTCTCTGAGCCAAAGAAGATTGTACCACAACACACCTTGCTGTTGAATGCAAATAAGGACATGGATGTCACACTTCCTCCTTATTCAGTTACATCTCTTGATCTGCTAAGATAG 2016 0.4062 MTQSNTHSRVSQIGIRSSNIMTSLFKITYIFFLLSLLALCFLSNANARVNHTSTLVVDGSKGSGRQIPDTFFGAFFEEINHAGAGGLWAEMVRNRGFEAGGANVPSNIYPWTIIGDESSILVSTDRTSCFERNKIALRMEVLCNAKSCPNNGVGISNSGFWGMNIEEGKKYRVIFYARALGVGPLDLKVSLVGDDGVSVASTQVGGYGSYAYKWRRMETTLEANATNHNSSLQITTNHRGVIWLDQVSAMPLDTHKGHGFRKDLFQMVANLKPKFFRFPGGCYVEGGYLRNAFRWKDSVGAWEERAGHFNDVWHYWTDDGFGFFEGLQFAEDVGALPVWVFNNGIGLHDAVDTSAVLPFVQEALDGIEFARGSPDSTWGSVRASMGHPQPFDLRFVAIGNEECGMPNYLGNYLKFYAAIKRSYPDIQIITNCDGSGQNLDMPADFYDFHIYTNAEDMFYKNTKFDAAPRSGPKAFVSEYAVWKDDARDGTLLSAVAEAAFLIGLERNSDLVHMVSYAPLFVNNNDRMWSPDAIVFNSHQLYGTPSYWNQQLFSESSGATWLNSTLQTSSTKLVASAIEFNNTEDNKTYIRIKAVNFGDDPENLKISINGLTSNVQQSGSKMMVLTAPNVMEENSFSEPKKIVPQHTLLLNANKDMDVTLPPYSVTSLDLLR* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g2667 671 Gene3D Glycosidases 235 550 - -
Amo16g2667 671 SUPERFAMILY (Trans)glycosidases 229 560 IPR017853 -
Amo16g2667 671 Pfam Alpha-L-arabinofuranosidase C-terminal domain 478 663 IPR010720 GO:0046373|GO:0046556
Amo16g2667 671 PANTHER ALPHA-L-ARABINOFURANOSIDASE 1 36 670 - -
Amo16g2667 671 PANTHER ALPHA-L-ARABINOFURANOSIDASE-LIKE PROTEIN 36 670 - -
Amo16g2667 671 Gene3D - 551 669 IPR013780 -
Amo16g2667 671 SMART alpha_l_af_c 477 663 IPR010720 GO:0046373|GO:0046556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g2667 Amo-Chr16 117827055 117831059 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g2667 21 671 Glycoside Hydrolase AT3G10740 61.608 0.0 843
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g2667 K01209 - gmx:100802745 978.008
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g2667 16 117827055 117831059 Amo16g2667 16 117827055 117831059 ECH
Amo16g2667 16 117827055 117831059 Amo06g1948 06 70423065 70427287 hybridization