Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g1948 ATGTTATTATATAGATGTAGTTTGTTAACAAATCTTATCATCTTTAATCTTATCCGTCGAACAGTCACAGTAGAGTTTCAAATTGGGATAAGATCTTCAAACATTATGGCTTCACTTATTAAAATCACCTATATCTCTTTTCTACTTTCTTTGCTAGCATTGTGTTTTCTATCTAATGCCAATGCTAGTGCTAATCATACATCAACGTTAGTTGTTGATGGATCCAAGGGTTCTGGAAGACAAATTCCAGATACATTCTTTGGAGCATTCTTTGAAGAAATTAATCATGCTGGGGCAGGAGGACTTTGGGCAGAAATGGTTAGAAACAGAGGGTTTGAAGCCGGAGGTGCAAATGTTCCATCAAATATTTATCCATGGACAATTATTGGAGATGAATCATCCATTCTTGTGTCAACTGATCGCACTTCTTGCTTTGAAAGAAACAAGATTGCACTTCGTATGGAAGTTCTTTGCAATGCCAAGTCATGCCCTAACAATGGTGTTGGAATCTCTAACTCTGGATTCTGGGGCATGAACATTGAGGAAGGGAAGAAGTATAGAGTTATCTTCTATGCTAGGGCACTTGGAGTTGGACCACTTGATCTAAAGGTCTCGTTAGTGGGAGATGATGGTGTCAGTGTTGCTTCAACTCAAGTCGGAGGGTATGGAAGTTATGCTTATAAGTGGAGGAGAATGGAGACAACATTGGAAGCCAATGCTACAAATCATAATTCAAGCCTTCAAATTACCACAAATCATAGAGGTGTTATATGGCTAGACCAAGTCTCAGCTATGCCCTTAGACACACACAAGGGTCATGGTTTTAGAAAGGACCTGTTTCAGATGGTTGCAAATTTAAAGCCAAAATTTTTCAGATTTCCGGGGATATTTTTAAGTGGTTGCTATGTGGAAGGAGGTTATCTAAGAAATGCATTCCGTTGGAAAGACAGTGTTGGAGCATGGGAGGAGAGAGCTGGTCACTTTAATGATGTTTGGCATTATTGGACTGATGATGGTTTTGGTTTCTTTGAGGGCCTCCAGTTTGCAGAGGACGTTGGTGCATTGCCAGTATGGGTATTTAACAATGCTTCAATGGGGCATCCTCAACCCTTTGATTTGAGATTTGTTGCCATTGGAAATGAAGAATGCGGCATGCCAAACTATCTAGGAAACTACCTGAAGTTCTATGCAGCGATAAAGCGTTCTTATCCAGATATTCAGATTATCACAAACTGTGATGGTTCTGGGCAGAACTTAGACATGCCTGCAGATTTCTATGATTTTCATATTTACACAAACGCTGAAGATATGTTTTATAAGAATACCAAGTTTGATGCTGCACCACGATCTGGACCAAAGGCTTTTGTAAGTGAATACGCTGTTTGGAAGGATGATGCCCGCGATGGAACACTTTTATCTGCAGTGGCTGAAGCTGCATTCCTTATTGGATTGGAGAGGAACAGTGATCTTGTGCACATGGTTAGCTATGCACCACTTTTTGTCAATAACAACGACAGGATGTGGACCCCAGATGCAATTGTGTTTAACTCGCATCAACATTATGGAACTCCAAGCTATTGGAATCAACAACTATTTTCCGAATCTAGTGGAGCAACTTGGCTCAATTCAACGCTCCAAACTTCTTCCACTAAACTCGTAGCATCTGCAATTGAGTTTAATAATTCTGAAGATAATAAGACATATATTAGAATAAAGGCTGTGAACTTTGGAGATGACCCCGAGAATCTCAAGATTTCAATAAATGGGTTGACTTCAAATGTTCAAAAATCTGGATCGAAAATGATGGTGCTCACAGCACCTAATGTAATGGAAGAGAATTCTTTCTCTGAGCCAAACAAGATTGTACCACAACACACGTTGCTGTTGAATGCAAATAAGGACATGGATGTCACACTTCCTCCTTATTCAGTTACATCTCTTGATCTGTTAAGATAG 1956 0.3967 MLLYRCSLLTNLIIFNLIRRTVTVEFQIGIRSSNIMASLIKITYISFLLSLLALCFLSNANASANHTSTLVVDGSKGSGRQIPDTFFGAFFEEINHAGAGGLWAEMVRNRGFEAGGANVPSNIYPWTIIGDESSILVSTDRTSCFERNKIALRMEVLCNAKSCPNNGVGISNSGFWGMNIEEGKKYRVIFYARALGVGPLDLKVSLVGDDGVSVASTQVGGYGSYAYKWRRMETTLEANATNHNSSLQITTNHRGVIWLDQVSAMPLDTHKGHGFRKDLFQMVANLKPKFFRFPGIFLSGCYVEGGYLRNAFRWKDSVGAWEERAGHFNDVWHYWTDDGFGFFEGLQFAEDVGALPVWVFNNASMGHPQPFDLRFVAIGNEECGMPNYLGNYLKFYAAIKRSYPDIQIITNCDGSGQNLDMPADFYDFHIYTNAEDMFYKNTKFDAAPRSGPKAFVSEYAVWKDDARDGTLLSAVAEAAFLIGLERNSDLVHMVSYAPLFVNNNDRMWTPDAIVFNSHQHYGTPSYWNQQLFSESSGATWLNSTLQTSSTKLVASAIEFNNSEDNKTYIRIKAVNFGDDPENLKISINGLTSNVQKSGSKMMVLTAPNVMEENSFSEPNKIVPQHTLLLNANKDMDVTLPPYSVTSLDLLR* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g1948 651 Gene3D Glycosidases 249 530 - -
Amo06g1948 651 PANTHER ALPHA-L-ARABINOFURANOSIDASE 1 363 650 - -
Amo06g1948 651 PANTHER ALPHA-L-ARABINOFURANOSIDASE 1 49 362 - -
Amo06g1948 651 Pfam Alpha-L-arabinofuranosidase C-terminal domain 458 643 IPR010720 GO:0046373|GO:0046556
Amo06g1948 651 PANTHER ALPHA-L-ARABINOFURANOSIDASE-LIKE PROTEIN 363 650 - -
Amo06g1948 651 PANTHER ALPHA-L-ARABINOFURANOSIDASE-LIKE PROTEIN 49 362 - -
Amo06g1948 651 SMART alpha_l_af_c 457 643 IPR010720 GO:0046373|GO:0046556
Amo06g1948 651 SUPERFAMILY (Trans)glycosidases 244 540 IPR017853 -
Amo06g1948 651 Gene3D - 531 649 IPR013780 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g1948 Amo-Chr6 70423065 70427287 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g1948 36 651 Glycoside Hydrolase AT3G10740 57.014 0.0 761
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g1948 K01209 - gmx:100802745 901.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g2667 16 117827055 117831059 Amo06g1948 06 70423065 70427287 hybridization