Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g2377 ATGTATTCTCTCTCGTTCTCTGTTTCCGCAATCCCATTATATAACAAGAATGGCTGTTCTTCCTCCATCACTACGTTCAGAAAGCTATCCTTTATTTGCAGCAGCTACAAATTAAAGAAACTATCATTATTAATAAATAATCCATGTTATAATAACAACAATATTAGCATCATGTCAAAATGTTTAAAGTCTATTGCTATTTTTCCACTTCTCATACACACCCTATGCTTTCTTTTGTTCCCTCAACTCCTTCTATCTCATGATATTGGTGGTTTCGTTCGTCTTCCTGCTCGTTCAATCATCATCACTTCTCATCAATTATCTGAGTCCGAACCTCAGCAGGTGCACATATCCTTGGTGGGAAGAGACAAAATGAAGGTGTCATGGATAACAGAAGAAAAACACACAAAATCTGTGGTAGAATACGGAACAAAGTCAGGAGAATATTCCAAAAAAGCTACCGGAAAACATACTTCGTACCAGTATTTTTTCTATAACTCCGGCAGGATCCACAACGCCGTGATAGGGCCACTTGAGCCCAGCACCACTTACTTCTACCGCTGTGGAGGCTCCGGACCCGAGTTCTCATTCAAGACTCCACCGCCCAAGTTGCCCATCGAATTCGTCATTGTAGGGGACTTGGGACAAACGGAATGGACAGCATCGACGTTAAAACACGTGGATAGTAGTGACTACGACGTGTTCCTATTACCAGGTGACTTATCGTACGCCGATACACAGCAACCTCTATGGGACTCCTTCGGCCGTTTGGTGCAACCATACGCCAGCAAAAGGCCATGGATGGTTACTGAAGGAAACCACGAGATCGAGACTTTCCCCATCATCTACCCTCACGGCTTCAAAGCTTACAACGCAAGGTGGGCGATGCCGTTTCAAGAAAGCGGATCAACTTCAAATCTATACTACTCTTTCGAGGTTGCTTCCACCCACGTCATCATGCTCGGTTCCTATACGGACTTCGACGCCCAATCGGAGCAGTACACGTGGCTTCAGAACGATTTGGCTAACATCGATAGGAGCAAGACGCCTTGGGTGATTGTGCTGTTGCATGCGCCTTGGTATAATACTAATGAGGCACACCAAGGTGAAGGTGAGAGTATGAGAAAAGTTATGGAGGATTTGCTCTATCAAGCACGGGTTGACTTGGTTTTTGCTGGACATGTTCATGCCTATGAACGATTTACTCGAATTTATGACAATAAAGCTGATCCCTGTGGTCCAATATATGTGACAGTTGGGGATGGAGGAAATCGTGAAGGCCTTGCATTGAACTTTAAAAGCCCTCCAAGTCCACTCTCGTTGTACCGAGAGCCAAGCTTTGGCCATGGAAGGTTGAAAATAGTAGACGAAACACGTGCATACTGGTCATGGCACCGCAACAATGACACTGATGCAGTAATAGCTGATGGTGTTTGGATAGAGAGCTTAAGCAGATCAAAAGCATGTTCAGGTAGACCAGACCAAAAGGTTGTTCATGAAGAACTGTAG 1509 0.4447 MYSLSFSVSAIPLYNKNGCSSSITTFRKLSFICSSYKLKKLSLLINNPCYNNNNISIMSKCLKSIAIFPLLIHTLCFLLFPQLLLSHDIGGFVRLPARSIIITSHQLSESEPQQVHISLVGRDKMKVSWITEEKHTKSVVEYGTKSGEYSKKATGKHTSYQYFFYNSGRIHNAVIGPLEPSTTYFYRCGGSGPEFSFKTPPPKLPIEFVIVGDLGQTEWTASTLKHVDSSDYDVFLLPGDLSYADTQQPLWDSFGRLVQPYASKRPWMVTEGNHEIETFPIIYPHGFKAYNARWAMPFQESGSTSNLYYSFEVASTHVIMLGSYTDFDAQSEQYTWLQNDLANIDRSKTPWVIVLLHAPWYNTNEAHQGEGESMRKVMEDLLYQARVDLVFAGHVHAYERFTRIYDNKADPCGPIYVTVGDGGNREGLALNFKSPPSPLSLYREPSFGHGRLKIVDETRAYWSWHRNNDTDAVIADGVWIESLSRSKACSGRPDQKVVHEEL* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g2377 502 Gene3D - 203 489 IPR029052 -
Amo16g2377 502 PANTHER ACID PHOSPHATASE RELATED 44 494 IPR039331 GO:0003993
Amo16g2377 502 Pfam Purple acid Phosphatase, N-terminal domain 112 199 IPR015914 GO:0003993|GO:0046872
Amo16g2377 502 Pfam Calcineurin-like phosphoesterase 208 398 IPR004843 GO:0016787
Amo16g2377 502 Pfam Iron/zinc purple acid phosphatase-like protein C 413 473 IPR025733 -
Amo16g2377 502 Gene3D - 111 202 - -
Amo16g2377 502 PANTHER PURPLE ACID PHOSPHATASE 44 494 - -
Amo16g2377 502 SUPERFAMILY Purple acid phosphatase, N-terminal domain 102 201 IPR008963 GO:0003993|GO:0046872
Amo16g2377 502 CDD MPP_PAPs 205 482 IPR041792 -
Amo16g2377 502 SUPERFAMILY Metallo-dependent phosphatases 205 470 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g2377 Amo-Chr16 99968982 99976285 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g2377 95 494 Miscellaneous Gene Families AT2G03450 25.934 1.62e-29 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g2377 K22390 - gmx:100819446 795.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g2377 16 99968982 99976285 Amo16g2377 16 99968982 99976285 ECH
Amo16g2377 16 99968982 99976285 Amo06g1672 06 57513909 57518595 hybridization