Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g1672 ATGGGGATGGTGATGCAAATGCGTCTCTTGCAGTTGGTGGTGTTATTCATCGGAGTATTTGAATTAAACGGCGTCGTTTGTTCTTACACTCGGCCTCCTGTTCGTAAAACCATCTTTGTTCCTCATGACGATGATGATTCCAACTCACCAGAACAGGTACATATATCTCAAGTGGGCCAAGATAAGATGAGAATATCATGGATCACAGGCAACTCAGGCCCGGCTAAAGTTGAATACGGCCCATCTCCTTCTTCAATCGCATTTTCTGAAACTGGTTCTACCTCCTCATATCATTATACCTTGTATGAATCTGGAGAAATTCATGACGTGGTAATTGGGCCACTGAAGCCCAACACTGTCTACTACTACCGTTTGGGTGATCCACCTTCAAGCCGAACCTACCAGCTCAAGACTCCACCCTCTCAATTGCCCATCAAGTTTGCAGTTACTGGTGATCTTGGACAAACAGAATGGACAAAGTCAACGCTAGAGCATATAGAAAAGTCAAATTACGATATGCTACTACTAGCAGGTGACCTAGCCTACGCAGATATGGTACAAGAGCTATGGGACTCGTACGGTCGGCTGGTTGAGCCCTTAGCGAGCCAGCGTCCATGGATGGTGACGCAAGGGAACCATGAGATTGAGAAGATTCCCATCATCCATAGCGAGCCCTTCACAGCCTTCAATGCCAGGTGGCGAATGCCCTACGAGGAGAGCGCTTCTGACTCCAACCTCTACTACTCCTTCGACGTGGCCGGTGGTGTCCACGTCATCATGTTGGGTTCCTATACTGATTTTGAGGCTGGWTCYTCGCAGTACCAATGGCTTCAGGGGGACTTGAAGAAGGTCGATAGGTCCAAGACTCCTTGGGTGGTGGTGTTGATCCACGCGCCGTGGTATAACTCCAACCAAGCTCATCAGGGTGAGAAGGAATCCGTCAACATGAAAGCGGCTCTCGAAGGTTTGCTCTACCAAGCTCGTGTTGATYTTGTTTTTGCTGGACATGTTCATGCTTATGAGCGCTTTACGAGAGTTTATAAAGACAAAGCTGACAACTGTGGTCCAGTGCATATAACAATTGGTGATGGTGGAAACCGTGAAGGCCTTGCTACCAACTACATAGATCCGAAGCCAGACATATCGATATTCACGGAGGCTAGCTTTGGGCATGGAATATTGGAGGTATTTAATGCATCACATGCACTCTGGAGTTGGCATAGGAATGATAATGACGAAGCTACTGCTAGTGACTCTGCTTGGTTAACAACCCTCACTTCTAACCCTGCTTGTAAATGA 1299 0.4727 MGMVMQMRLLQLVVLFIGVFELNGVVCSYTRPPVRKTIFVPHDDDDSNSPEQVHISQVGQDKMRISWITGNSGPAKVEYGPSPSSIAFSETGSTSSYHYTLYESGEIHDVVIGPLKPNTVYYYRLGDPPSSRTYQLKTPPSQLPIKFAVTGDLGQTEWTKSTLEHIEKSNYDMLLLAGDLAYADMVQELWDSYGRLVEPLASQRPWMVTQGNHEIEKIPIIHSEPFTAFNARWRMPYEESASDSNLYYSFDVAGGVHVIMLGSYTDFEAGSSQYQWLQGDLKKVDRSKTPWVVVLIHAPWYNSNQAHQGEKESVNMKAALEGLLYQARVDXVFAGHVHAYERFTRVYKDKADNCGPVHITIGDGGNREGLATNYIDPKPDISIFTEASFGHGILEVFNASHALWSWHRNDNDEATASDSAWLTTLTSNPACK* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g1672 432 Gene3D - 49 141 - -
Amo06g1672 432 PANTHER ACID PHOSPHATASE RELATED 20 431 IPR039331 GO:0003993
Amo06g1672 432 PANTHER PURPLE ACID PHOSPHATASE 20 431 - -
Amo06g1672 432 SUPERFAMILY Purple acid phosphatase, N-terminal domain 37 140 IPR008963 GO:0003993|GO:0046872
Amo06g1672 432 Pfam Iron/zinc purple acid phosphatase-like protein C 355 413 IPR025733 -
Amo06g1672 432 Gene3D - 142 430 IPR029052 -
Amo06g1672 432 Pfam Calcineurin-like phosphoesterase 146 340 IPR004843 GO:0016787
Amo06g1672 432 CDD MPP_PAPs 144 423 IPR041792 -
Amo06g1672 432 Pfam Purple acid Phosphatase, N-terminal domain 50 138 IPR015914 GO:0003993|GO:0046872
Amo06g1672 432 SUPERFAMILY Metallo-dependent phosphatases 144 411 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g1672 Amo-Chr6 57513909 57518595 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g1672 50 394 Miscellaneous Gene Families AT1G13900 26.859 3.50e-30 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g1672 K22390 - gmx:100794764 685.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g2377 16 99968982 99976285 Amo06g1672 06 57513909 57518595 hybridization