Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1552 ATGGCGGATTTAGAGAATTTGCTTTTGGAGGCTGCAGGGAGGACCGGGAGAAACCGAAATTCTATTCCGCCTTCTAGAAGAGGACGTGATGATGGGTATTCGGATGGTGGGACTGACTCTAGGGAGGATGATTCCGATGGTGAGATTGGTTATGCTGGCAGAAAGCCCTCTGGATCTCAAGTTCCTCTCAAGAAGAGATTAGATCCAGCGGAGAGGGATGATAATGAGGGAAGTCAGGAAGAAGGGGGTGATGATGTTGATGGCCGTTCTGATCATGAGGATGATAGTAGTAGCGAATCGAATATTGGCGATGATCTTTATAAGAATGAAGATGATAGACGGAAGCTTTCTGAGATGACTGAACTTGAAAGAGAGATGATATTGTCGGATAGGGCTTCTAAAAAGGATGATAAAAATCTGCTAGGGAAGATAGTGTCAAAGCGGGAAAAAGGAAAGGCAAGTGTACCTAGAAAACAGACTCCTCCTCTCCCATCATCTCGTGTGCGTTCATCAGCCAGATCTGCTGACAGATCAACTGCCAAGGATGATGCGTTAAATGAACTGCGTGCAAAGCGTTTGAAACAGCAGGATTCAGAGGCAAACCGCAAGATGACAGAGGCATCTGGAGGTTCAGGGACTGGATTTTTAGCCAAGCACAGACCTTTCACTTCAACAGGCTTTAGTAGCTCAAGTCAAAGTGAGAGTGAAAGTGGATCTCATAGTGACGATGAAAGAATTGTTGACAGTGATGATGACAGGGCATTATCTGGATTTGAGGGTCCTTCATTTGAGGATATAAAAGAAATCACCATTCCCCGGTCAAAACTTGCAAAATGGTTTATGGAGCCTTTCTTTGAGGAGTTAATTGTTGGTTGTTTTGTGAGAGTTGGCATTGGTAGATCAAAATCTGGGGCTATTTACAGGCTATGCATGGTGAAAAATGTTGATGCGACAGATCCTGATCGACAGTACAAATTAGAGAATAGAAGCACACACAAGTACTTAAATCTTGTCTGGGGAAATGAAACTTCTGCTGCAAGGTGGCAAATGGCTATGGTTAGTGACTCTCCTCCACGAGAGGAGGAGTTTAAACAGTGGCTTAAGGAACTGGAGCGAACTGGTGGTCGGATGCCAATCAAACGGGATATGTTAGATAAAAAACAAGCTATAAAAAAGATCAACACGTTTGTTTACTCGGCAGCTACTGTAAAGCAGATGCTACAAGAGAAAAAATCTGCCTCATCAAGGCCGCTAAATGTTGCGGCTGAAAAGGATCGCCTGAGGAATGAGTTGGAAAAGGCAATACTTATGCATAATGAAGCTGAAGTGGAGAGGATCCGGACAAGGCTGCAGGAATTGGAGGCATCCAGGGAAGCTAGGGAGAAGAATGCTAAGGCATTGAGGCTTGCTGAGATGAACAGAAAGAACAGGTTTGAAAACTTAAAAAATGCTTCCGACTTAAAGCGGAAAGCTTTGAAAGCAGGGGATGCAGGTTATGATCCATTTTCCAGGAGATGGACTAGATCAAGGAACTATTATGCTGCAAAACCTGGTGAAGAGGCTGCTGACAGAAACAACAGTGCTGGCAGCAAAGTGGCCATTGCAGGAAGCACTATCCCGAATGTAGCCGTGAACGCAGAGGCTGGCATGGTGGCTACAGCTGTGGCCTTGGAAGCTGCTGCTGATGCTGGGAAGTTAGTTGACACAAGTGCACCCGTCGATCAAGGGACAGAGTCAAACATGCTTCACAATTTTGAGCTGCCGATTTCATTATCATCGCTTCAAAGGTTTGGGGGATCCCAAGGAGTTGAGGCAGGGTTTATGGCTAAAAAGCAGAAAGTAGAAGCAACAGTTGGATTTAGAGTCCCAGAAAATGATGGAAGAAGGCACGCGTTGACATTAACAGTTAGTGATTACAAGAGAAGAAGGGGGCTCCTTTGA 1941 0.4503 MADLENLLLEAAGRTGRNRNSIPPSRRGRDDGYSDGGTDSREDDSDGEIGYAGRKPSGSQVPLKKRLDPAERDDNEGSQEEGGDDVDGRSDHEDDSSSESNIGDDLYKNEDDRRKLSEMTELEREMILSDRASKKDDKNLLGKIVSKREKGKASVPRKQTPPLPSSRVRSSARSADRSTAKDDALNELRAKRLKQQDSEANRKMTEASGGSGTGFLAKHRPFTSTGFSSSSQSESESGSHSDDERIVDSDDDRALSGFEGPSFEDIKEITIPRSKLAKWFMEPFFEELIVGCFVRVGIGRSKSGAIYRLCMVKNVDATDPDRQYKLENRSTHKYLNLVWGNETSAARWQMAMVSDSPPREEEFKQWLKELERTGGRMPIKRDMLDKKQAIKKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRNELEKAILMHNEAEVERIRTRLQELEASREAREKNAKALRLAEMNRKNRFENLKNASDLKRKALKAGDAGYDPFSRRWTRSRNYYAAKPGEEAADRNNSAGSKVAIAGSTIPNVAVNAEAGMVATAVALEAAADAGKLVDTSAPVDQGTESNMLHNFELPISLSSLQRFGGSQGVEAGFMAKKQKVEATVGFRVPENDGRRHALTLTVSDYKRRRGLL* 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1552 646 MobiDBLite consensus disorder prediction 237 258 - -
Amo16g1552 646 PANTHER PLUS-3 DOMAIN PROTEIN 1 646 - -
Amo16g1552 646 SMART rtf1 260 372 IPR004343 GO:0003677
Amo16g1552 646 MobiDBLite consensus disorder prediction 1 259 - -
Amo16g1552 646 MobiDBLite consensus disorder prediction 174 201 - -
Amo16g1552 646 MobiDBLite consensus disorder prediction 222 236 - -
Amo16g1552 646 Coils Coil 424 470 - -
Amo16g1552 646 Gene3D - 261 393 IPR036128 GO:0003677
Amo16g1552 646 SUPERFAMILY Plus3-like 262 392 IPR036128 GO:0003677
Amo16g1552 646 PANTHER UNCHARACTERIZED 1 646 - -
Amo16g1552 646 MobiDBLite consensus disorder prediction 159 173 - -
Amo16g1552 646 Pfam Plus-3 domain 265 370 IPR004343 GO:0003677
Amo16g1552 646 MobiDBLite consensus disorder prediction 23 50 - -
Amo16g1552 646 MobiDBLite consensus disorder prediction 82 155 - -
Amo16g1552 646 ProSiteProfiles Plus3 domain profile. 260 395 IPR004343 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1552 Amo-Chr16 28789863 28792649 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1552 K15178 - gmx:100818650 910.598
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g1552 16 28789863 28792649 Amo06g0325 06 4702566 4705423 hybridization