Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0325 ATGGCGGATTTAGAGAATTTGCTTTTGGAGGCTGCAGGGAGGACCGGGAGAAACCGAAATTCTATTCCGCCTTCTAGAAGAGGACGTGATGATGGGTATTCGGATGGTGGGACTGACTCTAGGGAGGATGATTCCGATGGTGAGATTGGTTATGCTGGCAGAAAGCCCTCTGGATCTCAAGTTCCTCTCAAAAAGAGATTAGATCCAGCGGAGAGGGATGATAATGAGGGAAGTCAGGAAGGGGGTGATGATGTTGATGGCCGTTCTGATCATGAGGATGATAGTAGTAGCGAATCAAATATTGGCGATGATCTTTATAAGAATGAAGATGATAGACGGAAGCTTTCTGAGATGACTGAACTTGAAAGAGAGATGATATTGTCGGATAGGGCTTCTAAAAAGGATGATAAAAATCTGCTGGGGAAGATAGTGTCAAAGCGGGAAAAAGGAAAGGCAAGTGTACCTAGAAAACAGACTCCACCTCTCCCATCATCTCGTGTGCGTTCATCAGCCAGATCTGCTGACAGATCAACTGCCAAGGATGATGCGTTAAATGAACTGCGTGCAAAGCGTTTGAAACAGCAGGATTCAGAGGCAAACCGCAAGATGACAGAGGCATCTGGAGGTTCAGGGACTGGATTTTTAGCCAAGCACAGACCTTTCACTTCAACAGGCTTTAGTAGCTCAAGTCAAAGTGAGAGTGAAAGTGGATCTCATAGTGACGATGAAAGAATTGTTGACAGTGATGATGACAGGGCATTATCTGGATTTGAGGGTCCTTCATTTGAGGATATAAAAGAAATCACCATTCCCCGGTCAAAACTTGCAAAATGGTTTATGGAGCCTTTCTTTGAGGAGTTAATTGTTGGTTGTTTTGTGAGAGTTGGCATTGGTAGATCAAAATCTGGGGCTATTTACAGGCTATGCATGGTGAAAAATGTTGATGCGACAGATCCTGATCGACAGTACAAATTAGAGAATAGAAGCACACACAAGTACTTAAATCTTGTCTGGGGAAATGAAACTTCTGCTGCAAGGTGGCAAATGGCTATGGTTAGTGACTCTCCTCCACGAGAGGAGGAGTTTAAACAGTGGCTTAAGGAACTGGAGCGAACTGGTGGTCGGATGCCAATCAAACGGGATATGTTAGATAAAAAACAAGCTATAAAAAAGATCAACACGTTTGTTTACTCGGCAGCTACTGTAAAGCAGATGCTACAAGAGAAAAAATCTGCCTCATCAAGGCCGCTAAATGTTGCGGCTGAAAAGGATCGCCTGAGGAATGAGTTGGAAAAGGCAATACTTATGCATAATGAAGCTGAAGTGGAGAGGATCCGGACAAGGCTGCAGGAATTGGAGGCATCCAGGGAAGCTAGGGAGAAGAATGCTAAGGCATTGAGGCTTGCTGAGATGAACAGAAAGAACAGGTTTGAAAACTTAAAAAATGCTTCCGACTTAAAGCGGAAAGCTTTGAAAGCAGGGGATGCAGGTTATGATCCATTTTCCAGGAGATGGACTAGATCAAGGAACTATTATGCTGCAAAACCTGGTGAAGAGGCTGCTGACAGAAACAACAGTGCTGGCAGCAAAGTGGCCATTGCAGGAAGCACTATCCCGAATGTAGCCGTGAACGCAGAGGCTGGCATGGTGGCTACAGCTGTGGCCTTGGAAGCTGCTGCTGATGCTGGGAAGTTAGTTGACACAAGTGCACCCGTCGATCAAGGGACAGAGTCAAACATGCTTCACAATTTTGAGCTGCCGATTTCGTTATCATCGCTTCAAAGGTTTGGGGGATCCCAAGGAGTTGAGGCAGGGTTTATGGCTAAAAAGCAGAAAGTAGAAGCAACAGTTGGATTTAGAGTCCCAGAAAATGATGGACGAAGGCACGCGTTGACATTAACAGTTAGTGATTACAAGAGAAGAAGAGGGCTCCTTTGA 1938 0.4505 MADLENLLLEAAGRTGRNRNSIPPSRRGRDDGYSDGGTDSREDDSDGEIGYAGRKPSGSQVPLKKRLDPAERDDNEGSQEGGDDVDGRSDHEDDSSSESNIGDDLYKNEDDRRKLSEMTELEREMILSDRASKKDDKNLLGKIVSKREKGKASVPRKQTPPLPSSRVRSSARSADRSTAKDDALNELRAKRLKQQDSEANRKMTEASGGSGTGFLAKHRPFTSTGFSSSSQSESESGSHSDDERIVDSDDDRALSGFEGPSFEDIKEITIPRSKLAKWFMEPFFEELIVGCFVRVGIGRSKSGAIYRLCMVKNVDATDPDRQYKLENRSTHKYLNLVWGNETSAARWQMAMVSDSPPREEEFKQWLKELERTGGRMPIKRDMLDKKQAIKKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRNELEKAILMHNEAEVERIRTRLQELEASREAREKNAKALRLAEMNRKNRFENLKNASDLKRKALKAGDAGYDPFSRRWTRSRNYYAAKPGEEAADRNNSAGSKVAIAGSTIPNVAVNAEAGMVATAVALEAAADAGKLVDTSAPVDQGTESNMLHNFELPISLSSLQRFGGSQGVEAGFMAKKQKVEATVGFRVPENDGRRHALTLTVSDYKRRRGLL* 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0325 645 SMART rtf1 259 371 IPR004343 GO:0003677
Amo06g0325 645 MobiDBLite consensus disorder prediction 173 200 - -
Amo06g0325 645 Gene3D - 260 392 IPR036128 GO:0003677
Amo06g0325 645 SUPERFAMILY Plus3-like 261 391 IPR036128 GO:0003677
Amo06g0325 645 Coils Coil 423 469 - -
Amo06g0325 645 Pfam Plus-3 domain 264 369 IPR004343 GO:0003677
Amo06g0325 645 MobiDBLite consensus disorder prediction 65 154 - -
Amo06g0325 645 MobiDBLite consensus disorder prediction 236 257 - -
Amo06g0325 645 ProSiteProfiles Plus3 domain profile. 259 394 IPR004343 GO:0003677
Amo06g0325 645 PANTHER UNCHARACTERIZED 1 645 - -
Amo06g0325 645 MobiDBLite consensus disorder prediction 158 172 - -
Amo06g0325 645 PANTHER PLUS-3 DOMAIN PROTEIN 1 645 - -
Amo06g0325 645 MobiDBLite consensus disorder prediction 221 235 - -
Amo06g0325 645 MobiDBLite consensus disorder prediction 23 50 - -
Amo06g0325 645 MobiDBLite consensus disorder prediction 1 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0325 Amo-Chr6 4702566 4705423 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0325 K15178 - gmx:100818650 908.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g1552 16 28789863 28792649 Amo06g0325 06 4702566 4705423 hybridization