Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1537 ATGAGCACCAGATCGTTAAAACTGTGGATGGTGATGCGTCTCTACGGATTGGAAGGTCTGCGAAATCACACGAGAAACCACATTAATCTTGCTGCTTATTTTGAGGACCTTGTTGGTCAGGATCCAAGGTTCAAGGTTGTTACGCCTCGCACGTTCTCTTTAGTCTGTTTTCGGCTTTTGCCTCCGGCTAACACAGAAGATACTAATAAACTGAACCGTGATCTACTTGACTCGGTGAATTCAACAGGAAGTGTTTTCATAACACACACGGTTCTATCAGGTCAGTTCATTCTGCGTTTTGCAGTAGGAGCACCATTGACAGAACAGAGGCATGTCGACGCAGCATGGCGAATTTTGCAAGAAAAGGCCACTGCTCTGCTTGGGAGTTTGTAG 393 0.458 MSTRSLKLWMVMRLYGLEGLRNHTRNHINLAAYFEDLVGQDPRFKVVTPRTFSLVCFRLLPPANTEDTNKLNRDLLDSVNSTGSVFITHTVLSGQFILRFAVGAPLTEQRHVDAAWRILQEKATALLGSL* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1537 130 Gene3D Aspartate Aminotransferase, domain 1 26 130 IPR015422 GO:0003824
Amo16g1537 130 Pfam Pyridoxal-dependent decarboxylase conserved domain 3 59 IPR002129 GO:0016830|GO:0019752|GO:0030170
Amo16g1537 130 PANTHER TYROSINE DECARBOXYLASE 2-RELATED 4 126 - -
Amo16g1537 130 PANTHER GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASE 4 126 - -
Amo16g1537 130 SUPERFAMILY PLP-dependent transferases 3 123 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1537 Amo-Chr16 28407257 28408136 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1537 K01593 - gmx:100791074 199.519
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g1537 16 28407257 28408136 Amo06g0317 06 4623021 4626584 hybridization