Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1518 ATGGGAGATAGTGAAACAGTAGTTGCCGAAGCACCTGCAGCTGAGACACATGCTGCTGCTGGGTTTGGTGACTCTGCCTCAAACCCTACTCAGGAAGCAGCTTCTACTGTTGCTGAGCCTGCTGCAGAGGCTGTTACTCAAGCCAATTCAGCTTATGCCTTAGGTTATTCGAATACTGGCGACGGGAATGCTTATGCTGGGGATCCTAATGCTATGCAACCAGAAGCCCAAACCAATTCAATGGAGGATTCCAAGCAAGGTACTGAAGCTCCAAGTGGGCTTGGAAGTGCAGCTACAGGCTCAAGTCAAGTAAATGGTGGTCCAGTGGGTGCAATAGCAAATGCAACAGGACTTGAAAATGGGAATGCATTAGGGAACACTGATGGATCGGCTGATGAGAAACAGCTTGTGGATGGTTATGCTGCCATGTCTGCTGAAGAAGATCGACTGTGGAATATTGTAAGAGCTAATTCTTCAGATTTTACGGCTTGGACTTCCTTGATCGAAGAGACAGAGAAGGTGGCCGAGGATAACATTCTGAAGATTCGAAGAGTTTATGATGCTTTTCTAGCTGAGTTTCCCTTATGTTATGGTTATTGGAAGAAATATGCTGATCATGAGGCACGGCTTGGCTCTGTCGATAAAGTTGTTGAAGTTTATGAACGTGCTGTTCAAGGTGTTACCTATTCAGTGGATATGTGGTTGCATTATTGCATATTTGCTATAGGCACGTATGGGGATCCAGACACTGTGCGTAGATCTCATCTGGTTAATGGCTAA 780 0.4564 MGDSETVVAEAPAAETHAAAGFGDSASNPTQEAASTVAEPAAEAVTQANSAYALGYSNTGDGNAYAGDPNAMQPEAQTNSMEDSKQGTEAPSGLGSAATGSSQVNGGPVGAIANATGLENGNALGNTDGSADEKQLVDGYAAMSAEEDRLWNIVRANSSDFTAWTSLIEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARLGSVDKVVEVYERAVQGVTYSVDMWLHYCIFAIGTYGDPDTVRRSHLVNG* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1518 259 MobiDBLite consensus disorder prediction 72 109 - -
Amo16g1518 259 MobiDBLite consensus disorder prediction 64 111 - -
Amo16g1518 259 SMART hat_new_1 177 209 IPR003107 GO:0006396
Amo16g1518 259 SMART hat_new_1 211 243 IPR003107 GO:0006396
Amo16g1518 259 SUPERFAMILY TPR-like 154 252 IPR011990 GO:0005515
Amo16g1518 259 MobiDBLite consensus disorder prediction 1 42 - -
Amo16g1518 259 PANTHER PRE-MRNA PROCESSING PROTEIN PRP39-RELATED 2 253 - -
Amo16g1518 259 PANTHER PRE-MRNA-PROCESSING FACTOR 39 2 253 - -
Amo16g1518 259 Gene3D Tetratricopeptide repeat domain 152 255 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1518 Amo-Chr16 27898756 27900882 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1518 K13217 - gmx:100787373 355.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g1518 16 27898756 27900882 Amo06g0308 06 4525673 4533624 hybridization