Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1490 ATGGCAAGCGCAGGGCTCTATCGTAGAGCTCTCCCTTCTCCTCCTGCAATCGACTTCTCCTCCCCTCAAGGCAAGAAGATCTTTGCTGAAGCTCTAGCTCATGGAACCATGGAGGGGTTCTTCAAGTTGATATCTTACTACCAAACACAATCAGAGCCTGCTTACTGCGGACTCGCCACACTTGCTGTTGTCCTTAATGCTCTATCCATTGATCCTGGTAGAAAATGGAAAGGTCCTTGGAGATGGTTTGATGACTCTATGCTGGATTGCTGTGAGCCTTTGGAAAAAGTCAAAGCAGAAGGAATCACATTTGGCAAAGTTGCGTGCTTGGCTCGGTGCAATGGGGCTAGAGTTGAAGCTTTTCATTCAGACGGAAGTACCATTGATGATTTTCGCAAGCGTGTGATCTCGTGCTGTTCCTCCGAGGATTGCCATGTGATTGTGTCTTATCACCGAGCAGCTTTCAATCAGACTGGTACTGGCCATTTTTCACCAATCGGAGGATATCACGCCGAAAGGGATATGGTTCTCATTCTGGATGTTGCTCGTTTTAAATATCCTCCTCATGGGTTCCCACTTCTCTTCTCTGGGATGCCATGA 600 0.475 MASAGLYRRALPSPPAIDFSSPQGKKIFAEALAHGTMEGFFKLISYYQTQSEPAYCGLATLAVVLNALSIDPGRKWKGPWRWFDDSMLDCCEPLEKVKAEGITFGKVACLARCNGARVEAFHSDGSTIDDFRKRVISCCSSEDCHVIVSYHRAAFNQTGTGHFSPIGGYHAERDMVLILDVARFKYPPHGFPLLFSGMP* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1490 199 PANTHER GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE 5 193 - -
Amo16g1490 199 Gene3D - 16 198 IPR038156 -
Amo16g1490 199 Pfam Phytochelatin synthase 7 189 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Amo16g1490 199 PANTHER GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE 5 193 IPR040409 GO:0016756|GO:0046872|GO:0046938
Amo16g1490 199 SUPERFAMILY Cysteine proteinases 13 189 IPR038765 -
Amo16g1490 199 ProSiteProfiles Phytochelatin synthase (PCS) domain profile. 1 199 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1490 Amo-Chr16 27289784 27292277 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1490 K05941 - mnt:21389379 347.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g1490 16 27289784 27292277 Amo06g0287 06 3872253 3876178 hybridization