Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0287 ATGGCAAGCGCAGGTCTCTATCGTAGAGCTCTCCCTTCTCCTCCTGCAATCGACTTCTCCTCTCCTCAAGGCAAGAAGATCTTTGCTGAAGCTCTAGCTCATGGAACCATGGAGGGCTTCTTCAAGTTGATATCTTACTACCAAACACAATCAGAGCCTGCTTACTGCGGACTCGCCACACTTGCTGTTGTCCTTAATGCTCTCTCCATTGATCCGGGTAGAAAATGGAAAGGTCCTTGGAGATGGTTTGATGACTCTATGCTGGATTGCTGTGAGCCTTTGGAAAAAGTCAAAGCAGAAGGAATCACATTTGGCAAAGTTGCGTGCTTGGCTCGGTGCAATGGGGCTAGAGTTGAAGCTTTTCATTCAGACGGAAGTACCATTGATGATTTTCGCAAGCGTGTGATCTCGTGCTGTTCCTCCGAGGATTGCCATGTGATTGTGTCTTATCACCGAGCAGCTTTCAATCAGACTGGTACTGGCCATTTTTCACCAATCGGAGGATATCACGCCGAAAGGGATATGGTTCTCATTCTGGATGTTGCTCGTTTTAAATATCCTCCTCATTGGGTTCCCACTTCTCTTCTCTGGGATGCCATGAATACAATTGATAAATCAACTGGACATCGCAGGGGGTACATGATTATTTCAAGACTTAATAGGGCACCATCAATACTTTATACTGTGAGTTGTAGACATGAGGGTTGGAGCAGTATCGCCAAATTCTTAGCCGAAGATGTTCCTATCCTTCTAAAGTCAGACGATTTAAAAGACATGCATGATGTACTCTCTCTTGTATTTAAGTCTCCTCCTAATAAATTAAGAGGGTTCATCACATGGGTTGCTGAAGTTCGTCGGCAAGAAGATGGGAATCTCACACTGAGCGAAGAGGAGAAAGGAAGGCTAGCTATCAAGGCAGACATATTGGAACAGATAAGGACAACTGTGCTCTTCAAACATGTGACCAGGTGGTTGGTTTCGGAAAGTTCGTGCTGCAACAATGGTTCAAAACTTGGCGACAAAGATATTTTACCAGAACTTGCCGCAAACATTTGTTGCCAAGGGGCAGATCTTTTGAATGGTTGCAGTAGGTCAGGTGGAAAATGCTGTGGACAAATAGACCTAAAGCATCTGAATATCGATGGTGAAAATCAAGCAACGCTGGTTTCTGGAACTGTTACAACTGGTGGCAGCAACGAACAAGGAGTTGATGTTTTGGTCCCTTTGTGTAAGAGAGAACCGAATAGTTTGTGTTTTTCTGATGAAGGTCAGTGCATCGGAATGCACCCTTCTACGGCAGATGTCTTAACAGTGCTTCTATTGGCGCTGCCGTTGCATACTTGGTCAGGCATTAAGGAAGAAAAGCTGCGTGAAGAAGTTAATAGCGTTCTAACAACTGAAAATCTTCCTCCCTTACTTCAGGAAGAGGTTTTGTTCCTGCGAGAGCAGCTCTGTTTTCTCATGATGGATATTGGTGCTTCTTCTGTTCCTTAA 1494 0.4458 MASAGLYRRALPSPPAIDFSSPQGKKIFAEALAHGTMEGFFKLISYYQTQSEPAYCGLATLAVVLNALSIDPGRKWKGPWRWFDDSMLDCCEPLEKVKAEGITFGKVACLARCNGARVEAFHSDGSTIDDFRKRVISCCSSEDCHVIVSYHRAAFNQTGTGHFSPIGGYHAERDMVLILDVARFKYPPHWVPTSLLWDAMNTIDKSTGHRRGYMIISRLNRAPSILYTVSCRHEGWSSIAKFLAEDVPILLKSDDLKDMHDVLSLVFKSPPNKLRGFITWVAEVRRQEDGNLTLSEEEKGRLAIKADILEQIRTTVLFKHVTRWLVSESSCCNNGSKLGDKDILPELAANICCQGADLLNGCSRSGGKCCGQIDLKHLNIDGENQATLVSGTVTTGGSNEQGVDVLVPLCKREPNSLCFSDEGQCIGMHPSTADVLTVLLLALPLHTWSGIKEEKLREEVNSVLTTENLPPLLQEEVLFLREQLCFLMMDIGASSVP* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0287 497 Pfam Phytochelatin synthase 7 213 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Amo06g0287 497 Pfam Domain of unknown function (DUF1984) 231 484 IPR015407 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Amo06g0287 497 Gene3D - 16 221 IPR038156 -
Amo06g0287 497 SUPERFAMILY Cysteine proteinases 13 217 IPR038765 -
Amo06g0287 497 PANTHER GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE 5 491 IPR040409 GO:0016756|GO:0046872|GO:0046938
Amo06g0287 497 ProSiteProfiles Phytochelatin synthase (PCS) domain profile. 1 221 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Amo06g0287 497 PANTHER GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE 5 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0287 Amo-Chr6 3872253 3876178 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0287 K05941 - gmx:100782042 814.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g1490 16 27289784 27292277 Amo06g0287 06 3872253 3876178 hybridization