Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1489 ATGGAAGGCTTCTACAGGTTGGTCTCTTATTTCCAGACCCAATCGGAACCCGCCTACTGCGGCCTCGCAAGCTTATCCATGGTCTTAAATGCTCTTGCCATTGATCCTGGTCGCAAATGGAAAGGACCTTGGAGATGGTTTGATGAATCTATGTTGGACTGTTGTGAGCCTCTTGAAAAGGTCAAAGCTAAAGGCATCTCCTTTGGGAAGCTCGTGTGCTTGGCTCATTGTGCTGGAGCAAAAGTTGAAGCCTTTCATGCTAGCCAGAGCAGCATCGATGCTTTCCGTGAATATGTCATGAATTGTTCAGCTTCTGATGAGTGTCATGTCATCTCTTCGTACCACAGGGCTGCTCTCAAACAAACTGGAACTGGTCATTTTTCACCTATTGGAGGCTATCATGCTGGGAAGGACATGGCGCTTATTTTGGATGTTGCACGATTTAAGTATCCCCCTCATTGGGTTCCACTTTCGCTTCTCTGGGAAGGCATGAACTATGTTGACGAATCCACTGGACAAACTAGGGGGTTCATGCTTATATCAAGACCACATAGGGAACCTGGCATGCTTTATACTCTGAGCTGCAAACATGAGAGTTGGATTAGTATTGCGAAATTCCTAATGGATGATGTTCCTCTTCTATTAAAATCAGAGGATGTGAAAGACATTCAAATGGTTCTTTCAATAATAGTCACATCACTTCCATCTAAATTTGAGGAATTTATCAAATGGTTGCGGAGATCAGGAGGCGAGAAGATGGTGGTCCAAGTTTAA 774 0.4432 MEGFYRLVSYFQTQSEPAYCGLASLSMVLNALAIDPGRKWKGPWRWFDESMLDCCEPLEKVKAKGISFGKLVCLAHCAGAKVEAFHASQSSIDAFREYVMNCSASDECHVISSYHRAALKQTGTGHFSPIGGYHAGKDMALILDVARFKYPPHWVPLSLLWEGMNYVDESTGQTRGFMLISRPHREPGMLYTLSCKHESWISIAKFLMDDVPLLLKSEDVKDIQMVLSIIVTSLPSKFEEFIKWLRRSGGEKMVVQV* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1489 257 Gene3D - 1 184 IPR038156 -
Amo16g1489 257 Pfam Phytochelatin synthase 1 177 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Amo16g1489 257 SUPERFAMILY Cysteine proteinases 1 181 IPR038765 -
Amo16g1489 257 ProSiteProfiles Phytochelatin synthase (PCS) domain profile. 1 185 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Amo16g1489 257 Pfam Domain of unknown function (DUF1984) 195 245 IPR015407 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Amo16g1489 257 PANTHER GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE 1 245 - -
Amo16g1489 257 PANTHER GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE 1 245 IPR040409 GO:0016756|GO:0046872|GO:0046938
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1489 Amo-Chr16 27282914 27286692 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1489 K05941 - gmx:547627 465.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g1489 16 27282914 27286692 Amo06g0286 06 3865250 3868546 hybridization