Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0286 ATGGCGATGGCGGGGTTGTATCGGCGGTTTCTTTCGTGCCCCCCCGCCGTGGAATTCGCTTCCTCTCCAGGCAAGCAACTGTTTCTTGAAGCTATTCAGAACGGAACCATGGAAGGCTTCTACAGGTTGGTCTCTTATTTCCAGACCCAATCGGAACCCGCCTACTGCGGCCTCGCAAGCTTATCCATGGTCTTAAATGCTCTTGCCATTGATCCTGGTCGCAAATGGAAAGGTCCTTGGAGATGGTTTGATGAATCTATGTTGGACTGTTGTGAGCCTCTTGAAAAGGTCAAAGCTAAAGGCATCTCCTTTGGGAAGCTCGTGTGCTTGGCTCATTGTGCTGGAGCAAAAGTTGAAGCCTTTCATGCTAGCCAGAGCAGCATCGATGCTTTCCGTGAATATGTCATGAATTGTTCAGCTTCTGATGAATGTCATGTCATCTCTTCGTACCACAGGGCTGCTCTCAAACAAACTGGAACTGGTCATTTTTCACCTATTGGAGGCTATCATGCTGGGAAGGACATGGCGCTTATTTTGGATGTTGCACGATTTAAGTATCCCCTCATTGGGTTCATGCTTATATCAAGGCCACATAGGGAACCTGGCATGCTTTATACTCTGAGCTGCAAACATGAGAGTTGGATTAGTATTGCAAAATTCCTAATGGATGATGTTCCTCTTCTATTAAAATCAGAGGATGTGAAAGACATTCAAATGGTTCTTTCAATAATAGTCACATCACTTCCATCTAAATTTGAGGAATTTATCAAATGGATTGCGGAGATCAGGAGGCGAGAAGATGGTGGTCCAAGTTTAAGCCCAGAGGAGAAAGCAAGGCTTGGTGTTAAGGAAGAGGTATTGAAACAAGTGCAGGAGACAGGGCTTTTCAAACATGTGATTCGCTTTATGTCAACTTCTTGCAGCATACATTCACCCACTTCAGGTGATGGAGACACCTTACCTGACATTGCTGCAAATGTTTGTTGCCAAGGAGCAGAAATTTTAGGTGGGAAAATTAGCTCATCGGCGGAGTATTGCTGTCATGAAACATGCTTGAAATGCTGCAAAGCTGAAGATGAAAAACCAGTAACAATGGTTTATGGGACTGTGGTAAATGGCAACAGTGAGCAAGGGGTTGATGTGCTGATTCCTTCTACTAGAAAATCATGTTGCACTTGCTCTAGCCTAAGTAATTCCATTAGGATGCACCCAGCTAGCACAGATGTGCTAACTGTGCTTTTACTGTCCTTACCATCTACGACATGGTCTGATATCAAAGATGAGCGGCTCTTGAGGGAAATAAATAGCCTGGTTTCAGTTGAAAATCTTCCTACTTTGCTTCAAGAAGAGGTTCTGCACTTAAGACGTCAGCTACATCTTCTGAAGAAATGTCAAGAGGATAAGGTAGATGAGGATCTCCATGCGCCTTTCTCTTAG 1437 0.444 MAMAGLYRRFLSCPPAVEFASSPGKQLFLEAIQNGTMEGFYRLVSYFQTQSEPAYCGLASLSMVLNALAIDPGRKWKGPWRWFDESMLDCCEPLEKVKAKGISFGKLVCLAHCAGAKVEAFHASQSSIDAFREYVMNCSASDECHVISSYHRAALKQTGTGHFSPIGGYHAGKDMALILDVARFKYPLIGFMLISRPHREPGMLYTLSCKHESWISIAKFLMDDVPLLLKSEDVKDIQMVLSIIVTSLPSKFEEFIKWIAEIRRREDGGPSLSPEEKARLGVKEEVLKQVQETGLFKHVIRFMSTSCSIHSPTSGDGDTLPDIAANVCCQGAEILGGKISSSAEYCCHETCLKCCKAEDEKPVTMVYGTVVNGNSEQGVDVLIPSTRKSCCTCSSLSNSIRMHPASTDVLTVLLLSLPSTTWSDIKDERLLREINSLVSVENLPTLLQEEVLHLRRQLHLLKKCQEDKVDEDLHAPFS* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0286 478 Gene3D - 16 190 IPR038156 -
Amo06g0286 478 PANTHER GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE 3 472 IPR040409 GO:0016756|GO:0046872|GO:0046938
Amo06g0286 478 PANTHER GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE 3 472 - -
Amo06g0286 478 Pfam Domain of unknown function (DUF1984) 209 458 IPR015407 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Amo06g0286 478 ProSiteProfiles Phytochelatin synthase (PCS) domain profile. 1 222 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Amo06g0286 478 SUPERFAMILY Cysteine proteinases 14 188 IPR038765 -
Amo06g0286 478 Pfam Phytochelatin synthase 10 187 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0286 Amo-Chr6 3865250 3868546 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0286 K05941 - gmx:547627 770
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g1489 16 27282914 27286692 Amo06g0286 06 3865250 3868546 hybridization