Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1477 TTCTTCTTCTTCTTCTTCTTCTTCTTTCCTGTTCGTGTTGCTTCTAGACGTTTCTGCAATATCTGTATTATTCAAACGATATTTGTTGCCTCAATTTGGCAGGGATCTAAGCCATCTGCCACGATGTATCTTCAGTTTTACATAAACGACAATGGTGACAAGGTCTACACCACTAAGAAAGAAACACCGCTTGGCTTAGCTACACAATCTGCTCACCCTGCTCGGTTTTCACCGGATGACAAATATTCAAGGCAGAGGGTGCTTCTGAAGAAGCGTTTTGGACTATTACCAACCCAGCAACCACCTCCAAAGTATTGA 318 0.4245 FFFFFFFFFPVRVASRRFCNICIIQTIFVASIWQGSKPSATMYLQFYINDNGDKVYTTKKETPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY* 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1477 105 Pfam Nucleolar RNA-binding protein, Nop10p family 44 93 IPR007264 GO:0001522|GO:0030515|GO:0042254
Amo16g1477 105 PANTHER NUCLEOLAR RNA-BINDING NOP10P-LIKE PROTEIN 42 105 - -
Amo16g1477 105 PANTHER RIBOSOME BIOGENESIS PROTEIN NOP10 42 105 IPR007264 GO:0001522|GO:0030515|GO:0042254
Amo16g1477 105 SUPERFAMILY Nop10-like SnoRNP 44 99 IPR036756 GO:0001522|GO:0030515|GO:0042254
Amo16g1477 105 Gene3D H/ACA ribonucleoprotein complex, subunit Nop10 51 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1477 Amo-Chr16 26978493 26980005 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1477 K11130 - twl:120011575 133.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g1477 16 26978493 26980005 Amo06g0282 06 3827376 3828836 hybridization