Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1255 ATGGTGAAATCAGAGTTGAAAAAGCAGAGCAACAACAAGCATGTGAATCTGATTGTGATTGTGTTGATCAAGCTTGCACTGTCATGCCTCTTGTTGGGTCTAGCCATCCATCTCCTCTTCTTCTTCTCTGATTCATCCCACAGTGAACTTCTTCGTGCTTCAACCAACCAAACACAAACCGCCGCTAACAATAATGTGGATGAACAAGAAGAAAAGTGTGATCTTTTTGTGGGAGATTGGGTGGCTGACCCATCTCCCCCACTCTATACTAATGAAAGCTGCCTTCTCATTGAAGATCACCAGAACTGCATGAGGAATGGACGCCCTGATTCTGAGTTCCTCTACTGGAGGTGGGCCCCACGGGCCTGTGGGCTACCCAGGTTCAGCCCAACCAAGTTCCTTCATATCATGAGGGATAAATCATGGGCCTTCATTGGTGACTCCATCTCCCGTAACCATGTTCAGTCTCTACTCTGCATTCTCTCCCAGATAGAAGCAGCCCAAGAGGTGTACCATGATGAGGAATTCAAATCAAAGATATGGAAGTTCCCTTCTTACAACTTCACACTCTCAGTAATATGGACCCCGTTCCTTATCAAAGCAGATATATTCGAAGACTCAAACGGACTTTCGTCCTCTGAAATCCAGCTTCATCTCGACACCCTGGATCACAAATGGACCAACCAATACCACAATTTCGACTACGTCGTCATAGCCGGAGGCAAATGGTTCCTCAAGACCGCAATCTACCACGAAAACGGAACCGTCAGGGGATGCCATTATTGCCCTGGAAAGAATCTGACCGAGCTAGGATTCGACTACGCATACCGCAAGGCGTTGCGGCAAGTCTTCCATTTTCTAACAAACTCTAGCCATAAAGCAACCGTTTTCTTCAGAACTACCACACCGGATCACTTTGAGAATGGAGAATGGTTCAGTGGTGGTTATTGCAATAGAACAGTACCTTTCGAAGAGGATCAAGTGAGGCTAAGTGACGTGGATTCCATGATGCGAGGGATTGAACTCCAAGAGCTTGAGAAGGTGGCAGCGTGGGAACATGGCGCCAGGCTGAAACTTTTGGACACAACAAGATTGGCTTTGTTGAGGCCTGATGGACATCCAGGACCGTACAGACAGTTTCATCCCTTTGCAAATGATATGAATGCGAAATTTCAGAATGATTGTTTGCATTGGTGTTTGCCGGGACCAATTGATTCATGGAATGATATTGTACTACAAATGTTGCTCAATGGCAGATCATAG 1263 0.4616 MVKSELKKQSNNKHVNLIVIVLIKLALSCLLLGLAIHLLFFFSDSSHSELLRASTNQTQTAANNNVDEQEEKCDLFVGDWVADPSPPLYTNESCLLIEDHQNCMRNGRPDSEFLYWRWAPRACGLPRFSPTKFLHIMRDKSWAFIGDSISRNHVQSLLCILSQIEAAQEVYHDEEFKSKIWKFPSYNFTLSVIWTPFLIKADIFEDSNGLSSSEIQLHLDTLDHKWTNQYHNFDYVVIAGGKWFLKTAIYHENGTVRGCHYCPGKNLTELGFDYAYRKALRQVFHFLTNSSHKATVFFRTTTPDHFENGEWFSGGYCNRTVPFEEDQVRLSDVDSMMRGIELQELEKVAAWEHGARLKLLDTTRLALLRPDGHPGPYRQFHPFANDMNAKFQNDCLHWCLPGPIDSWNDIVLQMLLNGRS* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1255 420 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 125 414 IPR026057 GO:0016740
Amo16g1255 420 Pfam PMR5 N terminal Domain 71 123 IPR025846 -
Amo16g1255 420 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 55 415 IPR029962 GO:0016413
Amo16g1255 420 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 26 55 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1255 Amo-Chr16 21311920 21313568 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1255 - - pop:7492762 600.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g1255 16 21311920 21313568 Amo12g0197 12 2908480 2913067 PCT
Amo12g0197 12 2908480 2913067 Amo16g1255 16 21311920 21313568 PCT