Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1251 ATGGCGGATTCCACCAAGGTGCGCTTGGTGCGCTGCCCCAAGTGTGAAAATCTCCTTCCTGAGCTTGCTGATTACTCTCTTTATCAATGCGGTGGTTGCGGTGCTGTTCTTCGAGAGAAGTCCGATGAGGGAAAGGTTGGAGGAGATTCTGGAAAACTAGAAAATTCTTTGGAGAAAAGCATAGCTGCTCCCACTTATACTTCAAATGTTGATACTAAGCCAGATAATGGATATGAGAGTTTGCCGAGTCAATCGAACGAGAAAGGTGTTGATGTCAGTGGCAGCAAAGATCAAGTGGGTAAAGCAATAGGAAGGGAAGGGGAGGAGCCCGAATCTCGGGCTGGTTTCGACGAAGGATCATCGAAATTCTCTGGGAGAATGTCTAGCCGGCGAAATGGAGACAAGCCTAGAGCTGATATGGAAAGTGTGAGATTTTCCACTTCAAATCATCCTGATGAGGGCACTTCAAATAGCTATTCATGGAGGAACCAGAATGGTGAGCAAGATCGAACCGAGCTTCTAAGGAAGTTGGATGAGTTAAAGGGCCAGCTAGGTAAATCTTCTGAAGCAGTTAGTGACTCAAAAGAGAAGGTTGAAAGGATGATTCCTCCAGATCCTTGGTTTCCGGATGGATCATCAAGGCTAAAAAACAGGACTTCAAGACAATTTTTTGACCCTGACAAACATGTTGCAGGTCCCCCATACTTCAATTATTGCCATGATCCATATGCTTATACTAGCAGTCATGAAATGGCTATGCCCAACTTCCATCCTGCAATGCATAATCTGAATCACATTCCTGGATATGGAGATCCTTATGCATCTCAAATGCTGAGGAGAGGTCCACATCAATTCCTACAACAATCAATGCATCCTTACTTTCCCGGACGCTATGTTGATAGTAGCACAGATTATGAACCATACACACATAATGCAATGCTTCACCCATCTTCTTGTTCTTGTTTTCATTGCTATGACAACAAACGCAGAGGTCCAGTGCCTAATAGCAGATTTCCTGATACCCCAAATGATCCTATGTTATACAATCACGACATACCAGGTGCATTTGGTCCACATGCTAGAACTGCCATTCCTCCAAAGCAGTTGCATAATAGATGGCCTAGTGAGATGAGTGGTTTTGTGCGAAGCCGTCCCCGAAAAGTAATGTTAGCTAGTGGCAGACAGCATTGCCGTCCCATAGCCGGTGGTTCTCCCTTCATTACATGTCATAATTGCTTTGAGCTATTGCAGCTGCCTAAAAAGGTGCTGGTTATGTTAAAGGGTCATCGGCAGAAAGTGCGATGTGGAGCTTGCTCCACAGACATAACTTTCACTGTCATCAACAGCAAGCTAGTTGTTTCTCCTCATCCGGAAAGGGCTGATGATGGCTCTAATGAGGTTGTAAGTAGGCGGATGTTTCATCCACGTGGTCACATGAACAGAAGTGGTGTTAACTTCTCTTCTGATGATTATTCTGGTTATGAGTTCCACTCAGTAGACAGAGTTGCAGGCCCAAGTTCAAATTCTAATAAGTCCCAGGATATGCAAAGCTTTCATTCTTCATCTCCCAGCACCTCTGAAGACGAAAATAGTCTAGAAATGATGACTGCTCCAAGTGATGCAACTAAGGCCATTAACAAAGGCTCTTCCTCTCCTCCTGCTGGCTCACCTTTGCAAGAGTATTTCGATTACTCTAACAATAATTATGCAGTAAATCGGTTTGGAAAAGGCAACCGAAGTAGTCGCTCAGAACAAGAGAAGGCCAAAGTTGACAAGGTTACATCACGGCAGAATTCTCTAAAGGAGGCAGCAGTTGCAACTGAGATGGATGTCCATGACTATTCTAACACTGCTGTCTCCCTGGATTCTAGAGATGATCATCCTAAATCCAACAAAGGGACTGACTCATTCTTGGCAAATATTATCAAGAAAAGCTTCCGAGATTTCTCTCGATCTGCTCAAACGGATGATCGAAGCAAAATCAATGTTACTGTAAATGGGCACCCCATTTCGGATCGTGTAATTAAGAAGGCCGAGAAGCTAGCTGGACCAATCCAGCCTGGAAATTATTGGTATGATTTTCGGGCTGGATTTTGGGGTGTCATGGGTGGACCTTGTCTTGGAATAATTCCTCCATTTATAGATGAGTTCAATTATCCTTTGTCGGACAAATGTTCTGGTGGAAACACTGGTGTTTTTGTAAACGGTAGGGAGCTTCACCTAAAAGATTTGGATTTGCTTGCTGGAAGGGGACTTCCCACTGAAAGAGATAGATCTTATATCATTGAAATTTCTGGGAGAGTCCTGGATGAAGACACAGGAGAAGAGCTAGAGAGCCTTGGAAAGCTTGCGCCAACAGTTGAGAAAGTGAAGCATGGATTTGGCATGAAAGTACCTAGACCAGTTGCATAA 2412 0.4407 MADSTKVRLVRCPKCENLLPELADYSLYQCGGCGAVLREKSDEGKVGGDSGKLENSLEKSIAAPTYTSNVDTKPDNGYESLPSQSNEKGVDVSGSKDQVGKAIGREGEEPESRAGFDEGSSKFSGRMSSRRNGDKPRADMESVRFSTSNHPDEGTSNSYSWRNQNGEQDRTELLRKLDELKGQLGKSSEAVSDSKEKVERMIPPDPWFPDGSSRLKNRTSRQFFDPDKHVAGPPYFNYCHDPYAYTSSHEMAMPNFHPAMHNLNHIPGYGDPYASQMLRRGPHQFLQQSMHPYFPGRYVDSSTDYEPYTHNAMLHPSSCSCFHCYDNKRRGPVPNSRFPDTPNDPMLYNHDIPGAFGPHARTAIPPKQLHNRWPSEMSGFVRSRPRKVMLASGRQHCRPIAGGSPFITCHNCFELLQLPKKVLVMLKGHRQKVRCGACSTDITFTVINSKLVVSPHPERADDGSNEVVSRRMFHPRGHMNRSGVNFSSDDYSGYEFHSVDRVAGPSSNSNKSQDMQSFHSSSPSTSEDENSLEMMTAPSDATKAINKGSSSPPAGSPLQEYFDYSNNNYAVNRFGKGNRSSRSEQEKAKVDKVTSRQNSLKEAAVATEMDVHDYSNTAVSLDSRDDHPKSNKGTDSFLANIIKKSFRDFSRSAQTDDRSKINVTVNGHPISDRVIKKAEKLAGPIQPGNYWYDFRAGFWGVMGGPCLGIIPPFIDEFNYPLSDKCSGGNTGVFVNGRELHLKDLDLLAGRGLPTERDRSYIIEISGRVLDEDTGEELESLGKLAPTVEKVKHGFGMKVPRPVA* 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1251 803 MobiDBLite consensus disorder prediction 60 92 - -
Amo16g1251 803 PANTHER EXTRA-LARGE G-LIKE PROTEIN 1 49 - -
Amo16g1251 803 PANTHER EXTRA-LARGE G-LIKE PROTEIN 86 801 - -
Amo16g1251 803 MobiDBLite consensus disorder prediction 179 214 - -
Amo16g1251 803 MobiDBLite consensus disorder prediction 142 164 - -
Amo16g1251 803 MobiDBLite consensus disorder prediction 502 533 - -
Amo16g1251 803 MobiDBLite consensus disorder prediction 579 596 - -
Amo16g1251 803 Coils Coil 163 183 - -
Amo16g1251 803 MobiDBLite consensus disorder prediction 101 116 - -
Amo16g1251 803 MobiDBLite consensus disorder prediction 41 164 - -
Amo16g1251 803 PANTHER EXTRA-LARGE G-PROTEIN-LIKE 1 49 IPR040244 GO:1900150
Amo16g1251 803 PANTHER EXTRA-LARGE G-PROTEIN-LIKE 86 801 IPR040244 GO:1900150
Amo16g1251 803 Pfam Probable zinc-ribbon domain 401 446 IPR021480 -
Amo16g1251 803 MobiDBLite consensus disorder prediction 573 598 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1251 Amo-Chr16 21257375 21260581 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1251 - - aip:107645715 1504.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g1251 16 21257375 21260581 Amo12g0198 12 2915191 2919800 PCT
Amo12g0198 12 2915191 2919800 Amo16g1251 16 21257375 21260581 PCT