Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0198 ATGGAGGATTCTTCAAAAATGCGGTTGGTGAGGTGCCCCAAGTGCCAGAATCTGCTTCCTGAGCTTGCTGATTACTCTGTTTATCAATGTGGTGGTTGTGGTGCTGTTCTTAGAGCAAAGCATAATAAGGGTTATGGAAGTGGTGCCTTATCGGAGATATCAGACGAAGAAATAGTTGGAAGAGATGGAGCTAAATTGGGAAATTCAAGGGGGAAAGGTGTGGTTGACTTGAGTAATAATTCGGATATTGATGTTAAGTCGAATGGTGGCTCCTCGAGGTATGGTCAAATAGATTTGGAGAAAGTGAAAAATGGATACGAGAGTGAGATTTCGAAGAATGGTTTTGATTCGAATGTAAACAAGGATGAAGGGGATAGTAAATCAATAAGAAGAGGGCAGCCGGAACAAAATTCGCATGAAAAAGGGCCCGAATTATTCGAGAGCATGTCTAATTGGCGAAATGGGGAAAGAAATGAGATGGAATTTTGGAGAAAGCCACCTGTTGATATAGAAGGTGTGAGGTTTTCCACTTTGAACTATCCTGATGAGGGAACTTCAAGCAGCTATTCTAGTTTCCCTTACAATTATGGGAAGCAATGGAGGAGTGAGAAAGACATGGATGGTGCAAGCAGGGTTCAGCACCTCGAGCAAGATCGCGCCGAGCTTCTAAGGAAGCTGGACGAGTTAACAAATCAGTTGAACCGGTCTCCTGAAGTGGGTAATAGTTCTAAAGAGCAGTTTCGTCCCGAAGGAAGGACAGTTTCGCCAGATCCTTATGGCAGCCGGGACACTTGGTCTTCGGACAGGTCGAACAGGACTATTTCAAGGCAGTTATTTGGCCCTAACAAACATGCACCTGGGCCACCTTATTTCGATTATCATCGTGATCCGTATGGTTATACAAGTAGTCATGAAATGGCTATGTCAAACTTCCATCCTTCAATGCATAATCCAAATTACATTCCTCGATTCGGGGATCCTTTCGCTGCCCAAATGAGGAGAGGTCCAAATCAGCTTTACCATCAGTTCCCACAACAACCAATGCATCCTTACTTTCCCGGCCGGTATTTTGATACTAGTTCAGATTCATATGAACTCTATGCACATAATGCAATGCTTCATCCACCTTCCTGCGCTTGCTTTTTTTGCTACGACAACAAACGCAGAGGTTCATTGCCGACACAACCAAATCCTGCATTTGTTAATAGTAGATTCCTTGATACCCCGAATGATCCCATGTTGTACCATCATGAGGTTCCGGGGACATTTGATCCTCATGTTCATGGTTCAAGAACTGCCATTCCTCCTGTTCATGAAACTCAATTACGTGCTAGAAGGCCTACTGGTGACTATAACTCTAACATGGCTAAGTCTGTCCGAACCCTTCCTCGAAAAGTAATGCCAGGAAGTGGTGCTCGGTATATCCATCCTATAGCTGGTGGTTCTCCGTTCATCACATGTTATAATTGCTTTGAGTTGCTACAACTTCCTATCAAAGCATTGGTTGTGGTGAAAAAACGGCGGCAAAAAGTGAGGTGTGGGGCTTGTTCTTCAGAAATAAGCTTTGCTATCAGCAATAAGAAGCTAATTATCTCTCTTAATTCGGAAGTGAAGGAAACTACTACAGCGATCAAAGATACTGCCAATGAGGCTGTGAACACAAGTGGTGTTAACTTCTCTTCAGATGATTATGCTGGCTATGATTTTCACTCGGTGGATAGAGAGTCTCCTGTGCCAGTTGTGGAGTCAAGAATGAACTCTAGAAAGCCCCAAGAGACACAAAGTTTCCCCTCTTCGTCTCTAGGTACCTCRGAGGATGAAAACAGTCCAGAAATTATGATTGCCGAAGGTGAAGCCGAAAAGTCCATTGCTCCCCTGAATAAAGCAGTGATATCTCCCCCACCTGCTGGATTTCCTCTTCAAGAGCATTTTGATTTCAGTGATAATAACCGTGTGATTAACCGGTTTGGTAAAGGCAACCTAAGTAGTCGGTCGGAACAAGAAAAAGGCAAAATAGTAGACAAGGTTCCCTCATCAAGGCAAACTTCTTTGAAAGAGGTGGTGCTTGCAACCGAAATGGATGTCCATGACTATTCGAACTCCGGAGCCTCCCAGGATACCGGCTATGCAAGCCAAGAACATGATCATCTCAGATCTAACAAGGGTGGTGAATCATTTTTCGCAAGCTTTATCAAGAAAGGTTTCAGGGATTCTTCTCAAACTAATGGAACCGATGATCATGGCAAATGCAAAGTTTCCATAAATGGACAGCCCTTGTCGGATCGTGCAATCAAGAAGGCGGAAAAGCTAGCTGGATCCATTCGTCCCGGAAATTACTGGTATGATTCTCGGGCCGGATTCTGGGGCGTCATGGGTGGACCTTGTCTTGGAATAATTCCACCATTTATAGAAGAGTTCAATTATCCTATGTCGGAAAAATGTGCTGGTGGAAATACCGGCATTTTTGTGAATGGTAGGGAGCTTCACCAAAGAGATTTGGACTTGCTTTCTGGAAGAGGACTTCCCCGTGACAGCGACAGATCTTACATCGTCGAAATCTCCGGGAGAATCCTAGATGAAGACACTGGAGAAGAGCTAGAGTGCCTTGGCAGACTTGCGCCGACAGTGGAGAAAGCAAAACATGGATTTGGCATGAAAGTACCAAGAACAGATGCATAA 2679 0.4423 MEDSSKMRLVRCPKCQNLLPELADYSVYQCGGCGAVLRAKHNKGYGSGALSEISDEEIVGRDGAKLGNSRGKGVVDLSNNSDIDVKSNGGSSRYGQIDLEKVKNGYESEISKNGFDSNVNKDEGDSKSIRRGQPEQNSHEKGPELFESMSNWRNGERNEMEFWRKPPVDIEGVRFSTLNYPDEGTSSSYSSFPYNYGKQWRSEKDMDGASRVQHLEQDRAELLRKLDELTNQLNRSPEVGNSSKEQFRPEGRTVSPDPYGSRDTWSSDRSNRTISRQLFGPNKHAPGPPYFDYHRDPYGYTSSHEMAMSNFHPSMHNPNYIPRFGDPFAAQMRRGPNQLYHQFPQQPMHPYFPGRYFDTSSDSYELYAHNAMLHPPSCACFFCYDNKRRGSLPTQPNPAFVNSRFLDTPNDPMLYHHEVPGTFDPHVHGSRTAIPPVHETQLRARRPTGDYNSNMAKSVRTLPRKVMPGSGARYIHPIAGGSPFITCYNCFELLQLPIKALVVVKKRRQKVRCGACSSEISFAISNKKLIISLNSEVKETTTAIKDTANEAVNTSGVNFSSDDYAGYDFHSVDRESPVPVVESRMNSRKPQETQSFPSSSLGTSEDENSPEIMIAEGEAEKSIAPLNKAVISPPPAGFPLQEHFDFSDNNRVINRFGKGNLSSRSEQEKGKIVDKVPSSRQTSLKEVVLATEMDVHDYSNSGASQDTGYASQEHDHLRSNKGGESFFASFIKKGFRDSSQTNGTDDHGKCKVSINGQPLSDRAIKKAEKLAGSIRPGNYWYDSRAGFWGVMGGPCLGIIPPFIEEFNYPMSEKCAGGNTGIFVNGRELHQRDLDLLSGRGLPRDSDRSYIVEISGRILDEDTGEELECLGRLAPTVEKAKHGFGMKVPRTDA* 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0198 892 MobiDBLite consensus disorder prediction 232 272 - -
Amo12g0198 892 PANTHER EXTRA-LARGE G-PROTEIN-LIKE 1 890 IPR040244 GO:1900150
Amo12g0198 892 Coils Coil 212 232 - -
Amo12g0198 892 MobiDBLite consensus disorder prediction 578 608 - -
Amo12g0198 892 MobiDBLite consensus disorder prediction 116 142 - -
Amo12g0198 892 MobiDBLite consensus disorder prediction 76 94 - -
Amo12g0198 892 MobiDBLite consensus disorder prediction 586 607 - -
Amo12g0198 892 MobiDBLite consensus disorder prediction 110 146 - -
Amo12g0198 892 Pfam Probable zinc-ribbon domain 479 523 IPR021480 -
Amo12g0198 892 PANTHER EXTRA-LARGE G-LIKE PROTEIN 1 890 - -
Amo12g0198 892 MobiDBLite consensus disorder prediction 76 96 - -
Amo12g0198 892 MobiDBLite consensus disorder prediction 232 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0198 Amo-Chr12 2915191 2919800 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0198 - - aprc:113849738 1189.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g0198 12 2915191 2919800 Amo12g0198 12 2915191 2919800 ECH
Amo16g1251 16 21257375 21260581 Amo12g0198 12 2915191 2919800 PCT
Amo12g0198 12 2915191 2919800 Amo16g1251 16 21257375 21260581 PCT