Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0958 ATGGACGCCAATGAAGCCAGAATCTTGCTCGGTTTCCCACCTAATACACGTCCCACTACCTCCCAGGTCAAATCAGCTTATAAGAAGAAGGTTTGGGAATCTCACCCTGATCTATTCCCAACTCATGAAAAGCCTCTTGCTGAATCTAGGTTTAAACTGATTTCGGAAGCATACGCATGCTTGCTATCTGGTGGGAGAGGAGGAATTTCAGACTCTGTTCAGTATTCACGCGTTGTTAGAACTGGAGTCCCTAGGAGTCAAGGAGGAAGTAAAAACCATGCTCTGATTAAAGTTCCCTTCATTTGTATCATTCTGGGAACTGTTGCACTTGGAGGTTTCAATGCTTCAAGGGCTTACAAAAAAACAAAAGGAAGAATACCCATCACACAATCCATTTCTACCTTGATGGAGTCTTAA 417 0.4317 MDANEARILLGFPPNTRPTTSQVKSAYKKKVWESHPDLFPTHEKPLAESRFKLISEAYACLLSGGRGGISDSVQYSRVVRTGVPRSQGGSKNHALIKVPFICIILGTVALGGFNASRAYKKTKGRIPITQSISTLMES* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0958 138 PANTHER OS07G0637100 PROTEIN 1 127 - -
Amo16g0958 138 Pfam DnaJ domain 10 61 IPR001623 -
Amo16g0958 138 ProSiteProfiles dnaJ domain profile. 5 79 IPR001623 -
Amo16g0958 138 SUPERFAMILY Chaperone J-domain 9 79 IPR036869 -
Amo16g0958 138 SMART dnaj_3 4 66 IPR001623 -
Amo16g0958 138 PANTHER - 1 127 - -
Amo16g0958 138 Gene3D DnaJ domain 8 81 IPR036869 -
Amo16g0958 138 CDD DnaJ 9 58 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0958 Amo-Chr16 15408169 15410710 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0958 - - gmx:100527460 211.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0958 16 15408169 15410710 Amo06g0082 06 842055 844147 hybridization