Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0082 ATGGACGCCAATGAAGCCAGAATCTTGCTCGGTTTCCCACCTAATACACGTCCCACCACCTCCCAGGTCAAATCAGCTTACAAGAAGAAAGTTTGGGAATCTCACCCTGACCTATTCCCAACTCATGAAAAGCCTCTTGCGGAATCTAAGTTTAAACTGATTTCGGAAGCATACGCATGCTTGCTATCTGGTGGGAGAGGAGGAATTTCAGATCTGTATTCACGAGTTGTTAGAACTGGAGTCCCTAGGGGTCAAGGAGGAAGTAAAAACCATGCTCTGATTAAAGTTCCCTTCATTTGTATCATTCTGGGAACTGTTGCACTTGGAGGTTTCAATGCTTCAAGGGCTTACAAAAAACAAAAGGAAGAATACCCATCACACAATCCATTTCTACCGTTGATGGAGTCTTAA 411 0.438 MDANEARILLGFPPNTRPTTSQVKSAYKKKVWESHPDLFPTHEKPLAESKFKLISEAYACLLSGGRGGISDLYSRVVRTGVPRGQGGSKNHALIKVPFICIILGTVALGGFNASRAYKKQKEEYPSHNPFLPLMES* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0082 136 Gene3D DnaJ domain 3 66 IPR036869 -
Amo06g0082 136 PANTHER OS07G0637100 PROTEIN 1 132 - -
Amo06g0082 136 ProSiteProfiles dnaJ domain profile. 5 77 IPR001623 -
Amo06g0082 136 Pfam DnaJ domain 10 61 IPR001623 -
Amo06g0082 136 CDD DnaJ 9 58 IPR001623 -
Amo06g0082 136 SUPERFAMILY Chaperone J-domain 9 85 IPR036869 -
Amo06g0082 136 PANTHER - 1 132 - -
Amo06g0082 136 SMART dnaj_3 4 66 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0082 Amo-Chr6 842055 844147 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0082 - - gmx:100527460 233.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0958 16 15408169 15410710 Amo06g0082 06 842055 844147 hybridization