Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0862 ATGATTTCTGCTGGAGGTAGGGATGCGAGAAAGGGGTTAGGTTTAGGGTTAGAGCTTGGATTAGGAGCTGGGAGGAGAGAGATGGTGGAGTCTGAGCTTGAAGAAGGTGAAGCATGCTCATATCAGAACCATGAAGATTATGACGCCACCGTTGATCCCGATGTTGCTCTCTCTTACATTGATGAAAAAATCCAAGATGTTCTGGGACACTTTCAGAAAGATTTTGAAGGCGGGGTGTCTGCAGAAAATTTGGGAGCAAAATTTGGTGGTTATGGATCATTTTTGCCAACCCATCACCGTTCACCAGTTTGGTCTCATCCAAGGACTCCACAAAAAGTTCACAGTCAAAATACTCCCAGATCTCCTAATATTGTGCAACTTGAGAGTGGGCAAGGGGATTCTGTACAATTTTCAACTGGAGCTCAGTCCTCAAGATTTGGGCCAGGTTCTGCTACCTCCTCAAGGCTGCCTGCAGTTAAGGCACCCTCTGTAGACGATGTAACCAATCAAGAAAAGTGCATATCAATCATTGGTGCTGAGGCACTCACTTCTAAGTGTGACTCCCTAAACATGAATGCAACTAGCATAGCAGACCAGAAGGTACTGAAGGTTCGAATAAAAATGGGGCCTGGAAATTTGACAACACGTAAAAATGCTGCGATATACAGTGGACTCGGTCTTGATATGTCACCAACATCGTCATTGGATGACAGTCCCTCAGAAAGCGAAGGAATTTCGCGTGGTCCTCAAGATGCTCCTTTTGAATCTCCTACAAGTATCCTTCAGGTTATGACAGTTCTCCCTATGTTGTTGTCACCTCTTCCTAATGATCTCATTGAATTAACCGAAAATGAAGTACATACTCGAGATGGTATTCGTCGTACTTTTCTTATGGATGGACCAGAAGGTTCTGGCATGCTGCTACATGAGTCTTACATGGCAAAAGGTGACAGAAAATTGTCAGGTGGGAAAAAGGTGAAGTCTTTGGAGGGTCACGAGTCCTCAGTGGAAGTCAAGGGTAGCAATAAGAAGAATACTCGGAATGATCTTGGAGCTCTTTCAACAAAGGAACAAGGTAGAAATGCATTGAACACGGAGGAGTTAGTTTCACAAACCTTGAAGCTACCACTTTTATCCCGTGATGATTTGGTAAAGGATGTTGATGGACCATGTAATTCATTGAACGAAACCAAAAAAGGTATAATGAGGGAGAAAACCGCTTCGGATCTGGCAGAAAAGGAATGGGTGGAGCCAACATTGGATGGAGTGAATGGTTTTGCTGAGAGGGCAAAGGGAGGTGCAGGGAGAAAATTTGTAGGAGGGAAGGTTTCTGAGGATAACTCATCATTTTATGCACCAAAGGACATTCCTCTTGGCGATAAAATTTGTGACTCAGGAATAACTGAATCTAATGTCTCCAAAGTTACGACAGCATCAAGCACTGAATTTACAGAACCTCCTAAGAAGGCTTATCAAAGAAACAGTCTGCGTGAACAAGACAGTATAACATTACCTGTTGTGAAAGAACATCCATTCCCTGTGGGAAAGAAGAAGTCAAAGGGAAGTAATAGCACTGTGGCTATAGAGAAGGAGAAAGAAAACTTGAAGACTGGATCCCCATTGGTTACTAAAATGAAAAAGAGTTCTGAAGATAGTTCAGCATCAAAAAGTGAAACTGAAGATGTCAGAGTACAGAAGGGTCTTTTAAAGCATAGAGATACTTATAAAGATTTCTTTGGGGAATTGGAAGAAGAGGACAGAATGGATTCAACGGAAAGCCCTAAGGAGGCTAAACTGAAGGACTCTGAGGTGGCTCAGAGGAGCATGTCTACAATCAATTGTGGAGCAAAGGAGAGATCAGCTGATAAGAAAGTTGATAAACCATTAACAGCTGAAGTATACCCCAAAATTGCCACAAATATCTGGTACACCGGAAATGGACATGGTACTGATGCTGAGAATGAGAATGTGAAAGGAGTTTCTGTCATGATGGCTCCTGTTGATACAGAAGATCATTGGGTACTATGTGACAGGTGTCACAAATGGCGTCTTCTTCCTGTTGGCACAAATCCTGATAGCCTACCTGAAAAGTGGCTCTGTAGTATGCTTGATTGGCTGCCTGACATGAATCGCTGTAGTTTTACTGAGGATGAAACCACAAAAGCTGTGATTGCATTATACCAAGTGCCTCCTCCTGATGGTAAAAGCAACCTGCAAAATGTCTCTGGGAGTGTTATGGTCGGAGGTACTGTGGCAACTGTTCAGCATCCTGATCAACACCAGCCAAATAATGATCTTAATGGCATGCCTGTGGGGAAGAAAAAAGTTGTGAAGGATTCATCAAATTATGAAAATAAAGATGGCTTTTCTCAATTGTCATCTTCTATAAAGAAAAATTTGCCATCATCAGTGAGAAGTAGGAGCTTAAATGAAGTGCACAAATCTCCTGTTGTCAGTGAGGCTGATGTTCCAGGGGAGAAACACAAAAATAAGCAGAAGTTGGAGAACAATTCTGATGGAGGTGATACAAAGAATATGAAAATGAAAAGCCGGAGGGATCCTGATCAAGATTGTTCTAGGCCAACCAAGAAAGTTAAGACTGACAAGATACGTTCTACTGATGAAGAATGGATTGCTGGACAGAGTGGGACTACTAGAAAGGCGGGCCATGGCTCTAATAGCAGCTTTCCAACTACTTCAGTTGGTAAAGATCGATCTAAACAGAAAGACCGCTCTTCTTCGAGGGACTCCAAATCCGAAAAAGACAGGCTGCAAATTTCTGCTGAGAACACAAAAGATAGGGGACATGGATTCTTGGACGAAGCATCCCTGGATTTAGGGAACTGTGATGCTGTTGACAGTGTTAAAAAGAGGAAACTGAAGGAGTATCAGGATGCTCAAACATGTAGTACAGGGAATCCCCACCTTCAGGGGAGCAGATTTTCTGCACAGGAGTTCAGTGATTCAAGGAAGGAAAAGAAGACAAGAAATTCAAAATCTGAAGGGAGAGAATCAAGTAGCAGTAAAGGCAGTGTTCGAACTGACAAAAGAGTTGGTCATATGAAAAACCATAAATTCAGGCAAAATCCTGGGAGTTCACATGTGAGCTTGGATGTAATGGACAGTTTAAAAAGGGACGTGGGATCAGCGCAGGCTTCTGTAGCCACCACTTCCAGTTCTTCTAAGGTTTCTGGCTCACATAAAACCAAAGCCAGCTTGCAGGAAGTGAAAGGCTCACCTGTGGAATCAGTTTCTTCATCGCCTATGAGAGTTTTATATACAGATAAATTTCCAACCAGGGAAGCTGCGGGGAAAGATGAGTCTCATGATACTGCCGTTGTGGATAGTCCAAGAAGATTCTCAGATGCTGAAGAGGGTGGAAGTGATCGATCTGGAGCAGCTAGGAAGGACAAATCTTTCACAATGGTCCATAAGTCTGATTTTCAGAATAAGGGTGTTAATCATACATCAGTTGCTAAACCTAAAGCTCAAATAACTGGCCATCATACCAATAGTGGTGTGGGCACTGTTTCTCAAGATGGTACTTATCCTATTAAAGAGCAGATCAAGAATCAATGTGAAGACAGGACTGATACATATTGTGCTAATGTGTCTAGAATCCTGAAGAACAATGCTGAATCAGATGTGAAGGGCAACAAGGAGAGCTGTAAGTCAGAAAATCCTGCAGAAACTGTCAAGAATACTAGTACTCCTATTCAGCCACTAGACAAGTCTCCTTTATCCGAGGCAAAACAAAATGATGGCAAAGTTAAGTCGCAAGAGAGGTCTGGGTTCAAGCCTGATCAAAGTGAGAATATACATGCTGGCAAGAAAGATCTTTCAGGGAAAAGTGAGAGTAGCAAAAAAGAGAGTCATTTCAATAAGGGGCTCGACTTTCAAGAAGTTGGTACAGATGCCGTAAACAAAAAGGAGGCACTAAATACTCCAAGTCAGTTGCCAGACTGTCATGCTGAAACATCTTCAAAGAGGCCTCTTTCAGAAAGAACAGATAAAGAAGTAATTGGAAAAGGGAAGTCTTTGTCATTGTTGCCCTCTGGAGGAGCTCAAGTTGAGCCATCAAGTAATTGCCCACGACCAGTTGTTGGTTTCCTTAAAGGAAATGGAGATGTGAAAGTTGAGCCTTCCAAAGTTGATGATGCATCTAAGTTGCCGAAAAAGCAAATAAAAAAATCTGATAATCAAAATGGAACTCAGCAAATTGGTTCAAGAAATCCTGTACCTAATGGACACAGATCTAAGGAGCTTGATGCCCCTACTCCAATTAGAAGGGATACTCATGCTGCTACCAATGCTTTGAAAGAAGCTAAAGATCTTAAGCATTTGGCTGATCGTCTTAAGAATGCTGGATCCACACTGGAGGGCACTAGTCTCTACTTCCAGGCAGCCCTCAAGTTTCTTCTTGGAGCCTCTCTGTTAGAATCTGGCAACAATGAACATGCTAAACACAGTGATGTAATCCAATCACTTCAAATATATAGCAGCACAGCAAAATTATGCGAGTTTTGTGCCCATGAATATGAGAAATCAAAAGATATGGCTTCAGCTGCTTTGGCCTACAAGTGCATGGAGGTGGCATACATGAGGGTTATATATTCTTCTCACAGTAGTGCAAGCAGAGATCGACATGAGCTCCAGACAGCTCTACAAATGGTTCCTTTAGGTGAGTCTCCTTCATCATCTGCCTCTGATGTTGACAATGTTAACAACACTACAGCAGCTGATAAGGTTGCCTTATCCAAGAGTGTAAATTCGCCCCAAGTTGCTGGGAACCATGTTATTGCTGCACGAAATCGTCCAAATTTTGTGCGGCTGCTCAACTTTGCTCAGGATGTTAATTTTGCCATGGAAGCCTCTAGGAAATCATGGAATGCTTTTGCAGCTGCTAATTCTAGTCCAGGCATGGACAAGAAAGCAGGAGGTATCTGCTCTATTAAGAAGGCTCTTGATTTTAGCTTTCAAGATGTGGAGGGTTTGCTACGTTTGGTACGGATTGCCGTGGAAGCCAACAATCGTTGA 5037 0.4257 MISAGGRDARKGLGLGLELGLGAGRREMVESELEEGEACSYQNHEDYDATVDPDVALSYIDEKIQDVLGHFQKDFEGGVSAENLGAKFGGYGSFLPTHHRSPVWSHPRTPQKVHSQNTPRSPNIVQLESGQGDSVQFSTGAQSSRFGPGSATSSRLPAVKAPSVDDVTNQEKCISIIGAEALTSKCDSLNMNATSIADQKVLKVRIKMGPGNLTTRKNAAIYSGLGLDMSPTSSLDDSPSESEGISRGPQDAPFESPTSILQVMTVLPMLLSPLPNDLIELTENEVHTRDGIRRTFLMDGPEGSGMLLHESYMAKGDRKLSGGKKVKSLEGHESSVEVKGSNKKNTRNDLGALSTKEQGRNALNTEELVSQTLKLPLLSRDDLVKDVDGPCNSLNETKKGIMREKTASDLAEKEWVEPTLDGVNGFAERAKGGAGRKFVGGKVSEDNSSFYAPKDIPLGDKICDSGITESNVSKVTTASSTEFTEPPKKAYQRNSLREQDSITLPVVKEHPFPVGKKKSKGSNSTVAIEKEKENLKTGSPLVTKMKKSSEDSSASKSETEDVRVQKGLLKHRDTYKDFFGELEEEDRMDSTESPKEAKLKDSEVAQRSMSTINCGAKERSADKKVDKPLTAEVYPKIATNIWYTGNGHGTDAENENVKGVSVMMAPVDTEDHWVLCDRCHKWRLLPVGTNPDSLPEKWLCSMLDWLPDMNRCSFTEDETTKAVIALYQVPPPDGKSNLQNVSGSVMVGGTVATVQHPDQHQPNNDLNGMPVGKKKVVKDSSNYENKDGFSQLSSSIKKNLPSSVRSRSLNEVHKSPVVSEADVPGEKHKNKQKLENNSDGGDTKNMKMKSRRDPDQDCSRPTKKVKTDKIRSTDEEWIAGQSGTTRKAGHGSNSSFPTTSVGKDRSKQKDRSSSRDSKSEKDRLQISAENTKDRGHGFLDEASLDLGNCDAVDSVKKRKLKEYQDAQTCSTGNPHLQGSRFSAQEFSDSRKEKKTRNSKSEGRESSSSKGSVRTDKRVGHMKNHKFRQNPGSSHVSLDVMDSLKRDVGSAQASVATTSSSSKVSGSHKTKASLQEVKGSPVESVSSSPMRVLYTDKFPTREAAGKDESHDTAVVDSPRRFSDAEEGGSDRSGAARKDKSFTMVHKSDFQNKGVNHTSVAKPKAQITGHHTNSGVGTVSQDGTYPIKEQIKNQCEDRTDTYCANVSRILKNNAESDVKGNKESCKSENPAETVKNTSTPIQPLDKSPLSEAKQNDGKVKSQERSGFKPDQSENIHAGKKDLSGKSESSKKESHFNKGLDFQEVGTDAVNKKEALNTPSQLPDCHAETSSKRPLSERTDKEVIGKGKSLSLLPSGGAQVEPSSNCPRPVVGFLKGNGDVKVEPSKVDDASKLPKKQIKKSDNQNGTQQIGSRNPVPNGHRSKELDAPTPIRRDTHAATNALKEAKDLKHLADRLKNAGSTLEGTSLYFQAALKFLLGASLLESGNNEHAKHSDVIQSLQIYSSTAKLCEFCAHEYEKSKDMASAALAYKCMEVAYMRVIYSSHSSASRDRHELQTALQMVPLGESPSSSASDVDNVNNTTAADKVALSKSVNSPQVAGNHVIAARNRPNFVRLLNFAQDVNFAMEASRKSWNAFAAANSSPGMDKKAGGICSIKKALDFSFQDVEGLLRLVRIAVEANNR* 1679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0862 1678 MobiDBLite consensus disorder prediction 1049 1092 - -
Amo16g0862 1678 MobiDBLite consensus disorder prediction 1213 1430 - -
Amo16g0862 1678 MobiDBLite consensus disorder prediction 581 603 - -
Amo16g0862 1678 MobiDBLite consensus disorder prediction 512 564 - -
Amo16g0862 1678 MobiDBLite consensus disorder prediction 962 1180 - -
Amo16g0862 1678 MobiDBLite consensus disorder prediction 318 344 - -
Amo16g0862 1678 MobiDBLite consensus disorder prediction 877 902 - -
Amo16g0862 1678 MobiDBLite consensus disorder prediction 1327 1342 - -
Amo16g0862 1678 MobiDBLite consensus disorder prediction 1099 1144 - -
Amo16g0862 1678 ProSiteProfiles Zinc finger CW-type profile. 667 720 IPR011124 GO:0008270
Amo16g0862 1678 Coils Coil 1435 1455 - -
Amo16g0862 1678 Gene3D - 662 722 - -
Amo16g0862 1678 MobiDBLite consensus disorder prediction 1228 1247 - -
Amo16g0862 1678 Pfam CW-type Zinc Finger 672 718 IPR011124 GO:0008270
Amo16g0862 1678 MobiDBLite consensus disorder prediction 903 940 - -
Amo16g0862 1678 MobiDBLite consensus disorder prediction 102 158 - -
Amo16g0862 1678 MobiDBLite consensus disorder prediction 108 151 - -
Amo16g0862 1678 MobiDBLite consensus disorder prediction 549 564 - -
Amo16g0862 1678 PANTHER CW-TYPE ZINC FINGER 28 1675 - -
Amo16g0862 1678 MobiDBLite consensus disorder prediction 523 537 - -
Amo16g0862 1678 MobiDBLite consensus disorder prediction 1378 1396 - -
Amo16g0862 1678 MobiDBLite consensus disorder prediction 1145 1180 - -
Amo16g0862 1678 MobiDBLite consensus disorder prediction 318 351 - -
Amo16g0862 1678 MobiDBLite consensus disorder prediction 985 1017 - -
Amo16g0862 1678 PANTHER CW-TYPE ZINC FINGER 28 1675 - -
Amo16g0862 1678 MobiDBLite consensus disorder prediction 1213 1227 - -
Amo16g0862 1678 MobiDBLite consensus disorder prediction 1310 1324 - -
Amo16g0862 1678 MobiDBLite consensus disorder prediction 230 255 - -
Amo16g0862 1678 MobiDBLite consensus disorder prediction 581 609 - -
Amo16g0862 1678 MobiDBLite consensus disorder prediction 1397 1413 - -
Amo16g0862 1678 MobiDBLite consensus disorder prediction 800 946 - -
Amo16g0862 1678 MobiDBLite consensus disorder prediction 230 245 - -
Amo16g0862 1678 MobiDBLite consensus disorder prediction 820 875 - -
Amo16g0862 1678 MobiDBLite consensus disorder prediction 1249 1296 - -
Amo16g0862 1678 MobiDBLite consensus disorder prediction 965 984 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0862 Amo-Chr16 13875543 13885970 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0862 - - aprc:113860968 2238.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0862 16 13875543 13885970 Amo16g0862 16 13875543 13885970 ECH
Amo16g0862 16 13875543 13885970 Amo06g0346 06 4922319 4930606 hybridization