Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0346 ATGATTTCTGCTGGAGGTAGGGATGCGAGAAAGGGGTTAGGTTTAGGGTTAGAGCTTGGATTAGGAGCTGGGAGRAGAGAGATGGTGGAGTCTGAGCTTGAAGAAGGTGAAGCATGCTCATATCAGAACCATGAAGATTATGACGCCACCGTTGATCCCGATGTTGCTCTCTCTTACATTGATGAAAAAATCCAAGATGTTCTGGGACACTTTCAGAAAGATTTTGAAGGCGGGGTGTCTGCAGAAAATTTGGGAGCAAAATTTGGTGGTTATGGATCATTTTTGCCAACCCATCACCGTTCACCAGTTTGGTCTCATCCAAGGACTCCACAAAAAGTTCACAGTCAAAATACWCCCAGATCTCCTAATATTGTGCAACTTGAGAGTGGGCAAGGGGATTCTGTACAATTTTCAACTGGAGCTCAGTCCTCAAGATTTGGSCCAGGTTCTGCTACCTCCTCAAGGSTGCCTGCAGTTAAGGCACCCTCTGTAGACGATGTAACCAATCAAGAAAAGTGCATATCAATCATTGGTGCTGAGGCACTCACTTCTAAGTGTGACTCCCTAAACATGAATGCAACTAGCATAGCAGACCAGAAGGTACTGAAGGTTCGAATAAAAATGGGGCCTGGAAATTTGACAACACGTAAAAATGCTGCGATATACAGTGGACTCGGTCTTGATATGTCACCAACATCGTCATTGGATGACAGTCCCTCAGAAAGCGAAGGAATTTCGCGTGGTCCTCAAGATGCTCCYTTTGAATCTCCTACAAGTATCCTTCAGGTTATGACAGTTCTCCCTATGTTGTTGTCACCTCTTCCTAATGATCTCATTGAATTAACCGAAAATGAAGTACATACTCGAGATGGTATTCGTCGTACTTTTCTTATGGATGGACCAGAAGGTTCTGGCATGCTGCTACATGAGTCTTACATGGCAAAAGGTGACAGAAAATTGTCAGGTGGGAAAAAGGTGAAGTCTTTGGAGGGTCAYGAGTYCTCAGTGGAAGTCAAGGGTAGCAATAAGAAGAATACTCGGAATGATCTTGGAGCTCTTTCAACAAAGGAACAAGGTAGAAATGCATTGAACAYGGAGGAGTTAGTTTCACAAACCTTGAAGCTACCACTTTTATCCCGTGATGATTTGGTAAAGGATGTTGATGGACCATGTAATTCATTGAACGAAACCAAAAAAGGTATAATGAGGGAGAAGACCGCTTCCGATCTGGCAGAAAAGGAATGGGTGGAGCCAACATTGGATGGAGTGAATGGTTTTGCTGAGAGGGCAAAGGGAGGTGCAGGGAGAAAATTTGTAGGAGGGAAGGTTTCTGAGGACAACTCATCATTTTATGCACCAAAGGACATTCCTCTTGGCGATAAAATTTGTGACTCAGGAATAACTGAATCTAATGTCTCCAAAGTTACGACAGCATCAAGCACTGAATTTACAGAACCTCCTAAGAAGGCTTATCAAAGAAACAGTCTGCGTGAACAAGACAGTATAACATTACCTGTTGTGAAAGAACATCCATTCCCTGTGGGAAAGAAGAAGTCAAAGGGAAGTAATAGCACTGTGGCTATAGAGAAGGAGAAAGAAAACTTGAAGACTGGATCCCCATTGGTTACTAAAMTGAAAAAGAGTTCTGAAGATAGTTCRGCATCAAAAAGTGAAACTGAAGATGTCAGAGTACAGAAGGGTCTTTTAAAGCMTAGAGATACTTATAAAGATTTCTTTGGGGAATTGGAAGAAGAGGACAGAATGGATTCAAYGGAAASCCMTAAGGAGGCTAAACTGAAGGACTCTGAGGTGGCTCAGAGGAGCATGTCTACAATCAATTGTGGAGCAAAGGAGAGATCAGCTGATAAGAAAGTTGATAAACCATTAACAGCTGAAGTATACCCCAAAATKGCCACAAATATCTGGTACACCGGAAATGGACATGGTACTGATGCTGAGAATGAGAATGTGAAAGGAGTTTCTGTCATGATGGCTCCTGTTGATACAGAAGATCATTGGGTACTATGTGACAGGTGTCACAAATGGCGTCTTCTTCCTGTTGGCACAAATCCTGATAGCCTACCTGAAAAGTGGCTCTGTAGTATGCTTGATTGGCTGCCTGACATGAATCGCTGTAGTTTTACTGAGGATGAAACCACAAAAGCTGTGATTGCATTATACCAAGTGCCTCCTCCTGATGGTAAAAGCAACCTGCAAAATGTCTCTGGGAGTGTTATGGTCGGAGGTACTGTGGCAACTGTTCAGCATCCTGATCARCACCAGCCAAATAAYGATCTTAATGGCATGCCTGTGGGGAAGAAAAAAGTTGTGAAGGATTCATCAAATTATGAAAATAAAGATGGCTTTTCTCAATTGTCATCTTCTATAAAGAAAAATTTGCCATCATCAGTGAGAAGTAGGAGCTTAAATGAAGTGCACAAATCTCCTGTTGTCAGTGAGGCTGATGTTCCAGGGGAGAAACACAAAAATAAGCAGAAGTTGGAGAACAATTCTGATGGAGGTGATACAAAGAATATGAAARYGAAAAGCCGGAGGGATCCTGATCAAGATTGTTCTAGGCCAACCAAGAAAGTTAAGACTGACAAGATACGTTCTACTGATGAAGAATGGATTGCTGGACAGAGTGGGACTACTAGAAAGGCGAGCCATGGCTCTAATAGCAGCTTTCCAACTACTTCAGTTGGTAAAGATCGATCTAAACAGAAAGACCGCTCTTCTTCGAGGGACTCCAAATCTGAAAAAGACAGGCTGCAAATTTCTGCTGAGAACACAAGAGATAGGGGACATGGATTCTTGGACGAAGCATCCCTGGATTTAGGGAACTGTGATGCTGTTGACAGTGTTAAAAAGAGGAAACTGAAGGAGTATCAGGATGCTCAAACATGTAGTACAGGGAATCCCCACCTTCAGGGGAGCAGATTTTCTGCACAGGAGTTCAGTGATTCAAGGAAGGAAAAGAAGACAAGAAATTCAAAATCTGAAGGGAGAGAATCAAGTAGCAGTAAAGGCAGTGTTCGAACTGACAAAAGAGTTGGTCATATGAAAAACCATAAATTCAGGCAAAATCCTGGGAGTTCACATGTGAGCTTGGATGTAATGGACAGTTTAAAAAGGGACGTGGGATCAGYGCAGGCTTCTGTAGCCACCACTTCCAGTTCTTCTAAGGTTTCTGGCTCACATAAAACCAAAGCCAGCTTGCAGGAAGTGAAAGGCTCACCTGTGGAATCAGTTTCTTCATCGCCTATGAGAGTTTTATATACAGATAAATTTCCAACCAGGGAAGYTGCGGGRAAAGATGAGTCTCATGATACTGCCGTTGTGGATAGTCCAAGAAGATTCTCAGATGCTGAAGAGGGTGGAAGTGATCGATCTGGAGCAGCTAGGAAGGACAAATCTTTCACAATGGTCCATAAGTCTGATTTTCAGAATAAGGGTGTTAATCATACATCAGTTGCTAAACCTAAAGCTCAAATAACTGGYCATCATACCAATAGTGGTGTGGGCACTGTTTCTCAAGATGGTACTTATCCTATTAAAGAGCAGATCAAGAATCAATGTGAAGACAGGACTGATACATATTGTGCTAATGTGTCTAGAATCCTGAAGAACAATGCTGAATCAGATGTGAAGGGCAACAAGGAGAGCTGTAAGTCAGAAAATCCTGCAGAAACTGTCAAGAATACTAGTACTCCTATTCAGCCACTAGACAAGTCTCCTTTATCCGAGGCAAAACAAAATGATGGCAAAGTTAAGTYGCAAGAGAGGTCTGGGTTCAAGCCTGATCAAAGTGAGAATATACATGCTGGCAAGAAAGATCTTTCAGGGAAAAGTGAGAGTAGCAAAAAAGAGAGTCATTTCAATAAGGGGCTCGACTTTCAAGAAGTTGGTACAGATGCTGTAAACAAAAAGGAGGCACTAAATACTCCAAGTCAGAATCAGTTGCCAGACTGTCATGCTGAAACATCTTCAAAGAGGCCTCTTTCAGAAAGAACAGATAAAGAAGTAATTGGAAAAGGGAAGTCTTTGTCATTGTTGCCCTCTGGAGGAGCTCAAGTTGATCCATCAAGTAATTGCCCACGACCAGTTGTTGGTTTCCTTAAAGGAAATGGAGATGTGAAAGTTGAGCCTTCCAAAGTTGATGATGCRTCTAAGTTGCMGAAAAAGCAAATAAAAAAATCTGATAATCAAAATGGAACTCAGCAAATTGGTTCAAGAAATCCTGTACCTAATGGACACAGATCTAAGGAGCTTGATGCCCCTACTCCAATTAGAAGGGATACTCATGCTGCTACCAATGCTTTGAAAGAAGCTAAAGATCTTAAGCATTTGGCTGATCGTCTTAAGAATGCTGGATCCACACTGGAGGGCACTAGTCTCTACTTCCAGGCAGCCCTCAAGTTTCTTCTTGGAGCCTCTCTGTTAGAATCTGGCAACAATGAMCATGCTAAACACAGTGATGTAATCCAATCACTTCAAATATATAGCAGCACAGCAAAATTATGCGAGTTTTGTGCCCATGAATATGAGAAATCAAAAGATATGGCTTCAGCTGCTTTGGCCTACAAGTGCATGGAGGTGGCATACATGAGGGTTATATATTCTTCWCACAGTAGTGCAAGCAGAGATCGACATGAGCTCCAGACAGCTCTACAAATGGTTCCTTTAGGTGAGTCTCCTTCATCATCTGCCTCTGATGTTGACAATGTTAACAACACTACAGCAGCTGATAAGGTTGCCTTATCCAAGAGTGTAAATTCGCCCCAAGTTGCTGGGAACCATGTTATTGCTGCACGAAATCGTCCAAATTTTGTGCGGCTGCTCAACTTTGCTCAGGATGTTAATTTTGCCATGGAAGCCTCTAGGAAATCATGGAATGCTTTTGCAGCTGCTAATTCTAGTCCAGGCATGGACAAGAAAGCAGGAGGTATCTGCTCTATTAAGAAGGCTCTTGATTTTAGCTTTCAAGATGTGGAGGGTTTGCTACGTTTGGTACGGATTGCCGTGGAAGCCAACAATCGTTGA 5043 0.4224 MISAGGRDARKGLGLGLELGLGAGRREMVESELEEGEACSYQNHEDYDATVDPDVALSYIDEKIQDVLGHFQKDFEGGVSAENLGAKFGGYGSFLPTHHRSPVWSHPRTPQKVHSQNTPRSPNIVQLESGQGDSVQFSTGAQSSRFGPGSATSSRXPAVKAPSVDDVTNQEKCISIIGAEALTSKCDSLNMNATSIADQKVLKVRIKMGPGNLTTRKNAAIYSGLGLDMSPTSSLDDSPSESEGISRGPQDAPFESPTSILQVMTVLPMLLSPLPNDLIELTENEVHTRDGIRRTFLMDGPEGSGMLLHESYMAKGDRKLSGGKKVKSLEGHEXSVEVKGSNKKNTRNDLGALSTKEQGRNALNXEELVSQTLKLPLLSRDDLVKDVDGPCNSLNETKKGIMREKTASDLAEKEWVEPTLDGVNGFAERAKGGAGRKFVGGKVSEDNSSFYAPKDIPLGDKICDSGITESNVSKVTTASSTEFTEPPKKAYQRNSLREQDSITLPVVKEHPFPVGKKKSKGSNSTVAIEKEKENLKTGSPLVTKXKKSSEDSSASKSETEDVRVQKGLLKXRDTYKDFFGELEEEDRMDSXEXXKEAKLKDSEVAQRSMSTINCGAKERSADKKVDKPLTAEVYPKXATNIWYTGNGHGTDAENENVKGVSVMMAPVDTEDHWVLCDRCHKWRLLPVGTNPDSLPEKWLCSMLDWLPDMNRCSFTEDETTKAVIALYQVPPPDGKSNLQNVSGSVMVGGTVATVQHPDQHQPNNDLNGMPVGKKKVVKDSSNYENKDGFSQLSSSIKKNLPSSVRSRSLNEVHKSPVVSEADVPGEKHKNKQKLENNSDGGDTKNMKXKSRRDPDQDCSRPTKKVKTDKIRSTDEEWIAGQSGTTRKASHGSNSSFPTTSVGKDRSKQKDRSSSRDSKSEKDRLQISAENTRDRGHGFLDEASLDLGNCDAVDSVKKRKLKEYQDAQTCSTGNPHLQGSRFSAQEFSDSRKEKKTRNSKSEGRESSSSKGSVRTDKRVGHMKNHKFRQNPGSSHVSLDVMDSLKRDVGSXQASVATTSSSSKVSGSHKTKASLQEVKGSPVESVSSSPMRVLYTDKFPTREXAGKDESHDTAVVDSPRRFSDAEEGGSDRSGAARKDKSFTMVHKSDFQNKGVNHTSVAKPKAQITGHHTNSGVGTVSQDGTYPIKEQIKNQCEDRTDTYCANVSRILKNNAESDVKGNKESCKSENPAETVKNTSTPIQPLDKSPLSEAKQNDGKVKXQERSGFKPDQSENIHAGKKDLSGKSESSKKESHFNKGLDFQEVGTDAVNKKEALNTPSQNQLPDCHAETSSKRPLSERTDKEVIGKGKSLSLLPSGGAQVDPSSNCPRPVVGFLKGNGDVKVEPSKVDDASKLXKKQIKKSDNQNGTQQIGSRNPVPNGHRSKELDAPTPIRRDTHAATNALKEAKDLKHLADRLKNAGSTLEGTSLYFQAALKFLLGASLLESGNNXHAKHSDVIQSLQIYSSTAKLCEFCAHEYEKSKDMASAALAYKCMEVAYMRVIYSSHSSASRDRHELQTALQMVPLGESPSSSASDVDNVNNTTAADKVALSKSVNSPQVAGNHVIAARNRPNFVRLLNFAQDVNFAMEASRKSWNAFAAANSSPGMDKKAGGICSIKKALDFSFQDVEGLLRLVRIAVEANNR* 1681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0346 1680 MobiDBLite consensus disorder prediction 1049 1092 - -
Amo06g0346 1680 Coils Coil 1437 1457 - -
Amo06g0346 1680 MobiDBLite consensus disorder prediction 1399 1415 - -
Amo06g0346 1680 MobiDBLite consensus disorder prediction 877 902 - -
Amo06g0346 1680 PANTHER CW-TYPE ZINC FINGER 28 1677 - -
Amo06g0346 1680 MobiDBLite consensus disorder prediction 1099 1144 - -
Amo06g0346 1680 ProSiteProfiles Zinc finger CW-type profile. 667 720 IPR011124 GO:0008270
Amo06g0346 1680 MobiDBLite consensus disorder prediction 1228 1247 - -
Amo06g0346 1680 MobiDBLite consensus disorder prediction 1310 1326 - -
Amo06g0346 1680 MobiDBLite consensus disorder prediction 478 560 - -
Amo06g0346 1680 MobiDBLite consensus disorder prediction 903 940 - -
Amo06g0346 1680 MobiDBLite consensus disorder prediction 108 151 - -
Amo06g0346 1680 MobiDBLite consensus disorder prediction 1329 1344 - -
Amo06g0346 1680 Gene3D - 662 722 - -
Amo06g0346 1680 MobiDBLite consensus disorder prediction 523 537 - -
Amo06g0346 1680 MobiDBLite consensus disorder prediction 100 163 - -
Amo06g0346 1680 MobiDBLite consensus disorder prediction 1145 1180 - -
Amo06g0346 1680 MobiDBLite consensus disorder prediction 783 813 - -
Amo06g0346 1680 Pfam CW-type Zinc Finger 672 718 IPR011124 GO:0008270
Amo06g0346 1680 MobiDBLite consensus disorder prediction 228 245 - -
Amo06g0346 1680 MobiDBLite consensus disorder prediction 985 1017 - -
Amo06g0346 1680 MobiDBLite consensus disorder prediction 1380 1398 - -
Amo06g0346 1680 MobiDBLite consensus disorder prediction 755 1180 - -
Amo06g0346 1680 MobiDBLite consensus disorder prediction 1217 1436 - -
Amo06g0346 1680 MobiDBLite consensus disorder prediction 820 875 - -
Amo06g0346 1680 MobiDBLite consensus disorder prediction 228 256 - -
Amo06g0346 1680 MobiDBLite consensus disorder prediction 965 984 - -
Amo06g0346 1680 MobiDBLite consensus disorder prediction 1249 1296 - -
Amo06g0346 1680 PANTHER CW-TYPE ZINC FINGER 28 1677 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0346 Amo-Chr6 4922319 4930606 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0346 - - aprc:113860968 2220.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0862 16 13875543 13885970 Amo06g0346 06 4922319 4930606 hybridization