Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0859 ATGGTGATTCCTTTCGAAGTTGGTTACAGCACATGTCACTGGTGTCATGTTATGGAAGTCGAGTCTTTTGAGGATGAAGGAGTAGCCAAGTTGTTGAACGATGGCTTTGTTAGCATTAAGGTGGATCGAGAGGAGCGACCAGATGTTGATAAGGTGTACATGACATATGTGCAGGCTTTGTATGGTGGAGGAGGTTGGCCACTAAGTGTGTTTCTTTCGCCTGACTTAAAACCTTTAATGGGTGGAACCTACTTTCCCCCTGAGGATAAGTATGGACGACCTGGCTTTAAAACTATTCTGAGAAAAGTAAAAGAGGCTTGGGATAGCAAGAAGGATTTGCTAGTTAAGAGTGGAGCAGCTGCAATTGAACAGCTTTCTGAGGCATTGTCTGCTAGTTCAGTTTCTGATAAATTGTCCGATGGAGTTCCAGATGATGCATTACGTCTGTGCGCTGAGCAGCTCTCTGAGACCTATGATTCCAAGTTTGGCGGGTTTGGGTCTGCACCTAAATTTCCCAGACCAGTTGAGACAAACTTGATGTTGTACCACTCCAAGAAATTGGATGATACTGGGAAGTTAGATGGAGCTAATGCAAATCGGGAAATGGTTTTCTTTACCTTGAAATCTATGGCAAAAGGGGGCATTCATGATCATATTGGAGGTGGCTTTCACAGATATAGTGTGGACGAGTGCTGGCATGTTCCACATTTCGAGAAGATGCTATATGATCAAGGCCAGATTGCTAATGTTTATTTAGATGCTTTTTCTATCACAAAAGATACCTTCTATTCATGTGTAGCACGGGATATTCTTGATTATTTAAGGAGAGACATGATTGGTCCAGAAGGTGAAATCTTTTCAGCAGAGGATGCTGACAGTGCAGAGACTGAAGGAGCTACAAGAAAAAAGGAGGGAGCATTTTACATATGGTCCCGCAAAGAGGTTGAAGACATACTTGGAGAGCATGCTGATATTTTTATTGAGCACTATTACATAAAGCAGTCTGGTAACTGTGACCTATCTAGCATGAGCGATCCTCATGATGAATTCAAGGGAAAGAATGTCCTGATTGAGAGAAAAGAATCAAAAGATCCTTCAGAGATCGCATCAAAGTACAGCATGTCAATCGAAACATATAAAGATATTCTTGGAGAATGTAGGCGTAAGCTGTTCGAAGTAAGGTCAAGGCGGGCAAGGCCACATTTGGATGATAAAGTTATTGTATCTTGGAATGGGCTGGCTATCTCATCTTTTGCCAGGGCCTCCAAGATTCTCCTGGGTGAAGCTGAGGGCACTAAGTTCTACTTTCCTGTTGTTGGCACTGAACCAAAGGAATACATGCAAATTGCGGAAAAAGCAGCATTATTTATTAAGAAGCAACTTCACAATGCTGAAACCCAAAGGCTGAACCATAGTTTCAGAAATTCTCCATCTAAAGCACCTGGTTTCTTGGATGATTATGCTTTTCTGATCTCTGGATTACTGGATCTCTATGAGTTTGGTGGTGGAATCAACTGGCTTCAATGGGCAATTGAATTGCAGGGCACTCAGGATGCTTTGTTTCTTGATGGGGATGGAGGTGGATATTTCAATAATACTGGGGAAGATACATCAGTTCTTCTCCGTGTGAAAGAAGACCATGATGGGGCAGAACCCTCTGGGAACTCGGTGTCAGCTATAAATCTTATTAGGTTGGCTTCCATGCTTGCTGAAAGTAAGGCTGAGCACTATAAGCGAAATGCAGAGCACCTTCTGGCTGTTTTTGAGAAAAGATTGAAAGCTTTGCCTATGGCAGTGCCCCTCATGTGTTGTGCAGCAGATATGCTGCGTGTACCTTCCAGAAAGCAAGTGGTTGTGGTCGGAGAAAGGAATTCTGAGGAATTTGAAAGAATGCTTGCAGCAGCACACGCATCATATGATCCAAACAAAACAGTTCTTCATATAGACCCCAACAACAAAGAAGAGATGGAATTTTGGGAACAGAATAACAGCAACATTGCTCTGATGGCGAAAAATAACCATGCAGCAAACAAGGTTGTAGCTCTTGTATGCCAAAACTTCACTTGTAGCCCGCCTGTGACTGATCAATCCTCACTTGATGCTTTACTATCCAAAAAATCGTCCTCTTCATCAACATGA 2139 0.4264 MVIPFEVGYSTCHWCHVMEVESFEDEGVAKLLNDGFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSPDLKPLMGGTYFPPEDKYGRPGFKTILRKVKEAWDSKKDLLVKSGAAAIEQLSEALSASSVSDKLSDGVPDDALRLCAEQLSETYDSKFGGFGSAPKFPRPVETNLMLYHSKKLDDTGKLDGANANREMVFFTLKSMAKGGIHDHIGGGFHRYSVDECWHVPHFEKMLYDQGQIANVYLDAFSITKDTFYSCVARDILDYLRRDMIGPEGEIFSAEDADSAETEGATRKKEGAFYIWSRKEVEDILGEHADIFIEHYYIKQSGNCDLSSMSDPHDEFKGKNVLIERKESKDPSEIASKYSMSIETYKDILGECRRKLFEVRSRRARPHLDDKVIVSWNGLAISSFARASKILLGEAEGTKFYFPVVGTEPKEYMQIAEKAALFIKKQLHNAETQRLNHSFRNSPSKAPGFLDDYAFLISGLLDLYEFGGGINWLQWAIELQGTQDALFLDGDGGGYFNNTGEDTSVLLRVKEDHDGAEPSGNSVSAINLIRLASMLAESKAEHYKRNAEHLLAVFEKRLKALPMAVPLMCCAADMLRVPSRKQVVVVGERNSEEFERMLAAAHASYDPNKTVLHIDPNNKEEMEFWEQNNSNIALMAKNNHAANKVVALVCQNFTCSPPVTDQSSLDALLSKKSSSSST* 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0859 712 CDD SSP411 7 108 IPR004879 -
Amo16g0859 712 PIRSF UCP006402_thioredoxin 1 710 IPR024705 -
Amo16g0859 712 Pfam Protein of unknown function, DUF255 4 125 IPR004879 -
Amo16g0859 712 Gene3D Glutaredoxin 2 134 - -
Amo16g0859 712 Gene3D - 438 614 IPR012341 GO:0005975
Amo16g0859 712 SUPERFAMILY Six-hairpin glycosidases 153 550 IPR008928 GO:0005975
Amo16g0859 712 PANTHER SPERMATOGENESIS-ASSOCIATED PROTEIN 20 5 705 IPR024705 -
Amo16g0859 712 SUPERFAMILY Thioredoxin-like 7 91 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0859 Amo-Chr16 13816281 13821850 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0859 - - ahf:112695829 1379.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0859 16 13816281 13821850 Amo16g0859 16 13816281 13821850 ECH
Amo16g0859 16 13816281 13821850 Amo06g0349 06 4977442 4983007 hybridization