Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0349 ATGTACGCATGCCAACGTACTCATTCTCTCTTACTCACACAGCCGATTCTCTCTCTTCCTTCTTCTTCCTTTCTTCTTCTCCGTTTTTCTTCTATGCTCCCTAGACTCACCCACAAGCTCAAGCTTCTACACTTACACTCTTTACATCCTCCTTCTTCCTTCCTCCTTCGCCGCCGCCACTATCCTCCTCAATTTTCCAAATTCCCATACTACCCTTCGTCTTCAGCGCCCTTTCTCCGTCTCAAACTCCCAATGGCATCTTCTTCTTCTTCTTCTTCCTTATCGCATTCGCATCACAAGCACTCCAATCGCCTAGCTTCCGAGCAAAGCCCCTATCTTCTTCAACATGCTCATAACCCCGTTGATTGGTACCCTTGGGGCGAAGAAGCTTTTGCTGAAGCGCGCAGAAGAGATGTACCTATCTTCTTATCAATTGGTTACAGCACATGTCACTGGTGTCATGTTATGGAAGTCGAGTCTTTTGAGGATGAAGGAGTAGCCAAGTTGTTGAACGATGGCTTTGTTAGCATTAAGGTGGATCGAGAGGAGCGACCAGATGTTGATAAGGTGTACATGACATATGTGCAGGCTTTGTATGGTGGAGGAGGTTGGCCACTAAGTGTGTTTCTTTCGCCTGACTTAAAACCTTTAATGGGTGGAACCTACTTTCCCCCTGAGGATAAGTATGGACGACCTGGCTTTAAAACTATTCTGAGAAAAGTAAAAGAGGCTTGGGATAGCAAGAAGGATTTGCTAGTTAAGAGTGGAGCAGCTGCAATTGAACAGCTTTCTGAGGCATTGTCTGCTAGTTCAGTTTCTGATAAATTGTCCGATGGAGTTCCAGATGATGCATTACGTCTGTGCGCTGAGCAGCTCTCTGAGACCTATGATTCAAAATTTGGCGGGTTTGGGTCTGCACCTAAATTTCCCAGACCAGTTGAGCCAAACTTGATGTTGTACCACTCCAAGAAATTGGATGATACTGGGAAGTTAGATGGAGCTAATGCAAATCGGGAAATGGTTTTCTTTACCTTGAAATCTATGGCAAAAGGGGGCATTCATGATCATATTGGAGGTGGCTTTCACAGATATAGTGTGGAYGAGTGCTGGCATGTTCCACATTTCGAGAAGATGCTATATGATCAAGGCCAGATTGCTAATGTTTATTTAGATGCTTTTTCTATCACAAAAGATACCTTCTATTCATGTGTAGCRCGGGATATTCTTGATTATTTAAGGAGAGACATGATTGGTCCAGAMGGTGAAATCTTTTCAGCAGAGGATGCTGACAGTGCAGAGACTGAAGGAGCTACAAGAAAAAAGGAGGGAGCATTTTACATATGGTCCCGCAAAGAGGTTGAAGACATACTTGGAGAGCATGCTGATATTTTTATTGAGCACTATTACATAAAGCAGTCTGGTAACTGTGACCTATCTAGCATGAGCGATCCTCATGATGAATTCAAGGGAAAGAATGTCCTGATTGAGAGAAAAGAATCAAAAGATCCTTCAGAGATCGCATCAAAGTACAGCATGTCAATCGAAACATATAAAGATATTTTTGGTGAATGTAGGCGTAAGCTGTTCGAAGTAAGGTCAAGGCGGGCAAGGCCACATTTGGATGATAAAGTTATTGTATCTTGGAATGGGCTGGCTATCTCATCTTTTGCCAGGGCCTCCAAGATTCTCCTGGGTGAAGCTGAGGGAACTAAGTTCTACTTTCCTGTTGTTGGCACTGAACCAAAGGAATACATGCAAATTGCGGAAAAAGCAGCATTATTTATTAAGAAGCAACTTCACAATGCTGAAACCCAAAGGCTGAACCATAGTTTCAGAAATTCTCCATCTAAAGCACCTGGTTTCTTGGATGATTATGCTTTTCTGATCTCTGGATTACTGGATCTCTATGAGTTTGGTGGTGGAATCAACTGGCTTCAATGGGCAATTGAATTGCAGGGCACTCAGGATGCTTTGTTTCTTGATGGGGATGGAGGTGGATATTTCAATAATACTGGGGAAGATACATCAGTTCTTCTCCGTGTGAAAGAAGACCATGATGGGGCAGAACCCTCTGGGAACTCAGTGTCAGCTATAAATCTTATTAGGTTGGCTTCCATGCTTGCTGAAAGTAAGGCTGAGCACTATAAGCGAAATGCAGAGCACCTTCTGGCTGTTTTTGAGAAAAGATTGAAAGCTTTGCCTATGGCGGTGCCCCTCATGTGTTGTGCAGCAGATATGCTGCGTGTACCTTCCAGAAAGCAAGTGGTTGTGGTCGGAGAAAGGAATTCTGAGGAATTTGAAAGAATGCTTGCAGCAGCACACGTATCATATGATCCAAACAAAACAGTTCTTCATATAGACCCCAACAACAAAGAAGAGATGGAATTTTGGGAACAGAATAACAGCAACATTGCTCTGATGGCGAAAAATAACCAKGCAGCAAACAAGGTTGTAGCTCTTGTATGCCAAAACTTCACTTGTAGCCCGCCTGTGACTGATCAATCCTCACTTGATGCTTTACTATCCAAAAAATCGTCCTCTTCATCAACATGA 2553 0.4324 MYACQRTHSLLLTQPILSLPSSSFLLLRFSSMLPRLTHKLKLLHLHSLHPPSSFLLRRRHYPPQFSKFPYYPSSSAPFLRLKLPMASSSSSSSLSHSHHKHSNRLASEQSPYLLQHAHNPVDWYPWGEEAFAEARRRDVPIFLSIGYSTCHWCHVMEVESFEDEGVAKLLNDGFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSPDLKPLMGGTYFPPEDKYGRPGFKTILRKVKEAWDSKKDLLVKSGAAAIEQLSEALSASSVSDKLSDGVPDDALRLCAEQLSETYDSKFGGFGSAPKFPRPVEPNLMLYHSKKLDDTGKLDGANANREMVFFTLKSMAKGGIHDHIGGGFHRYSVDECWHVPHFEKMLYDQGQIANVYLDAFSITKDTFYSCVARDILDYLRRDMIGPXGEIFSAEDADSAETEGATRKKEGAFYIWSRKEVEDILGEHADIFIEHYYIKQSGNCDLSSMSDPHDEFKGKNVLIERKESKDPSEIASKYSMSIETYKDIFGECRRKLFEVRSRRARPHLDDKVIVSWNGLAISSFARASKILLGEAEGTKFYFPVVGTEPKEYMQIAEKAALFIKKQLHNAETQRLNHSFRNSPSKAPGFLDDYAFLISGLLDLYEFGGGINWLQWAIELQGTQDALFLDGDGGGYFNNTGEDTSVLLRVKEDHDGAEPSGNSVSAINLIRLASMLAESKAEHYKRNAEHLLAVFEKRLKALPMAVPLMCCAADMLRVPSRKQVVVVGERNSEEFERMLAAAHVSYDPNKTVLHIDPNNKEEMEFWEQNNSNIALMAKNNXAANKVVALVCQNFTCSPPVTDQSSLDALLSKKSSSSST* 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0349 850 CDD SSP411 124 246 IPR004879 -
Amo06g0349 850 Gene3D - 576 752 IPR012341 GO:0005975
Amo06g0349 850 Pfam Protein of unknown function, DUF255 103 263 IPR004879 -
Amo06g0349 850 Gene3D Glutaredoxin 100 272 - -
Amo06g0349 850 PIRSF UCP006402_thioredoxin 88 848 IPR024705 -
Amo06g0349 850 PANTHER SPERMATOGENESIS-ASSOCIATED PROTEIN 20 85 843 IPR024705 -
Amo06g0349 850 SUPERFAMILY Six-hairpin glycosidases 291 688 IPR008928 GO:0005975
Amo06g0349 850 SUPERFAMILY Thioredoxin-like 101 229 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0349 Amo-Chr6 4977442 4983007 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0349 - - ahf:112695829 1622.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0859 16 13816281 13821850 Amo06g0349 06 4977442 4983007 hybridization