Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0853 ATGGAAGGTGTGGCGAGCATGGTGGCTGAGAAGCCAGTGGTGATATTCAGCAAGAGCACGTGTTGCTTGAGTCACTCCATGAAATCACTGATAAGAAGCTTTGGTGCAAATGCAACTGTTTATGAGCTTGATGAGATCTCAAATGGAGAGCAGATTGAGAATGAGTTGATCCGAATGGGGTGCCAGCCAAGTGTGCCAGCTGTGTTCATAGGCCAACAATTCATTGGTGGTTCTAAGAGAATCATGAGCCTCCATGTCAGGAATGAGTTAGTTCCATTGCTCAAAGATGCTAAGGCTATTTGGATTTGA 309 0.4531 MEGVASMVAEKPVVIFSKSTCCLSHSMKSLIRSFGANATVYELDEISNGEQIENELIRMGCQPSVPAVFIGQQFIGGSKRIMSLHVRNELVPLLKDAKAIWI* 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0853 102 SUPERFAMILY Thioredoxin-like 3 101 IPR036249 -
Amo16g0853 102 Gene3D Glutaredoxin 1 101 - -
Amo16g0853 102 PRINTS Glutaredoxin signature 13 31 IPR014025 -
Amo16g0853 102 PRINTS Glutaredoxin signature 58 71 IPR014025 -
Amo16g0853 102 PRINTS Glutaredoxin signature 72 85 IPR014025 -
Amo16g0853 102 PANTHER MONOTHIOL GLUTAREDOXIN-S2 PROTEIN 1 101 - -
Amo16g0853 102 CDD GRX_GRXh_1_2_like 12 93 - -
Amo16g0853 102 Pfam Glutaredoxin 13 75 IPR002109 -
Amo16g0853 102 PANTHER GLUTAREDOXIN 1 101 IPR011905 -
Amo16g0853 102 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
Amo16g0853 102 TIGRFAM GlrX-like_plant: glutaredoxin-like family 4 102 IPR011905 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0853 Amo-Chr16 13780596 13780934 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0853 1 102 Miscellaneous Gene Families AT4G15700 53.922 1.02e-41 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0853 K03676 - gmx:100820510 172.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0853 16 13780596 13780934 Amo16g0853 16 13780596 13780934 ECH
Amo16g0853 16 13780596 13780934 Amo06g0356 06 5014785 5015203 hybridization
Amo12g3065 12 118806350 118820920 Amo16g0853 16 13780596 13780934 PCT