Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0847 ATGGAGAAGGTGACAAGGTTGGCATCTGAGAAAGGGGTGGTGATCTTCACAAAAAGCTCATGCTGTTTGTGCTATGCAGTGAACATTCTGTTCCAAGAAATAGGGGTGAGTCCAGTGGTTCATGAGATTGATCAAGACCCTGATGGAAGGGAAATGGAGAAGGCTCTAATGAGGCTAGGTTGCAATGCACCTGTGCCTGCAGTCTTCATTGGAGGGAAGCTAATGGGGTCCACCAATGAAATCATGTCCATGCACCTAAGTGGTTCACTCACTCAACTCCTCAAGCCATACCAAACTTCATTATCTTGA 309 0.4628 MEKVTRLASEKGVVIFTKSSCCLCYAVNILFQEIGVSPVVHEIDQDPDGREMEKALMRLGCNAPVPAVFIGGKLMGSTNEIMSMHLSGSLTQLLKPYQTSLS* 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0847 102 CDD GRX_GRXh_1_2_like 13 93 - -
Amo16g0847 102 SUPERFAMILY Thioredoxin-like 1 97 IPR036249 -
Amo16g0847 102 PANTHER GLUTAREDOXIN 1 99 IPR011905 -
Amo16g0847 102 Pfam Glutaredoxin 13 74 IPR002109 -
Amo16g0847 102 PANTHER MONOTHIOL GLUTAREDOXIN-S2 PROTEIN 1 99 - -
Amo16g0847 102 Gene3D Glutaredoxin 1 101 - -
Amo16g0847 102 TIGRFAM GlrX-like_plant: glutaredoxin-like family 4 99 IPR011905 -
Amo16g0847 102 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0847 Amo-Chr16 13614559 13615396 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0847 1 95 Miscellaneous Gene Families AT4G15670 48.421 7.34e-33 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0847 K03676 - vvi:100247747 186.037
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0847 16 13614559 13615396 Amo16g0847 16 13614559 13615396 ECH
Amo16g0847 16 13614559 13615396 Amo12g3065 12 118806350 118820920 PCT
Amo12g3039 12 118494119 118494680 Amo16g0847 16 13614559 13615396 PCT