Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0834 ATGATAAGCAACAGGAGAAGAGTGAAGCAGAAGAGGAAGAAGAAGAAGATGATGGATGAAATGACCAAGAATCAACCTTCACACTGGTGGTGGCTTGACACCACCACCACCAACCGTTCCCCGTGGCTTCAATCCACTCTTTCAGAACTAAATGAGAAGACAAAAGCTATGTTAAAGGTAATTGAAGAAGATGCAGATTCCTTTGCCAAGCGTGCAGAGATGTACTACAAGAAGAGGCCAGAGCTTTTGAGAATGGTTGAAGATTTCTATAGGACGCATCGCTCGCTAGCCGAGCGCTATGATCAAGTCAGACCCGAAACTGGAATCGGCCTACTCAATTCAGGAGGATCCCCGTTTGCATCCGCCAAGCATCGGTTCGAGAAGTTGCTGACTTTTGCAGATGATCATCGTGGTTATGATACCTATTCAGAGAGTTATGATGTGGAATCTGAAGTTGATGATCCTGAGCAAGAAGTAGAAGAAGAAGAAGAAGAGAGCAAGTCTAATCACAAAGAAGAGGTGGAAGTTTCATATGTTGCTGTGAATGATGAAGTGATAAGATTGAGGGATGAGATGAAGAGACTCAATGAAGAGAACAAGGCACAGAAGGATCAACTCAAGATGAAAGATTCTGCTTGTGATGAAGTAATGATGCTGAGGGAAGAAATAGAGAGGCTTAAAGAAGAGAATGAGGCACAGAGGGAACAACTCAAGCAGAAGGATGAGGAGAAGATAGAGGTGATAAGGCAGCTGAGTATGGCAATTGATGTGATGAAGGAGGAGAATGTGAAGATGAGAAACTTCATTGTTGCCAAGGAATCCACCAAGAAATGGAACAAGAAACCATTTGAGTTCAACAAATTTGTGGGTGAATTGTCTGAGAAATTTTTCAATTTCAATTTCAATGTGATTCCAAAGAATGAGCCTAGTGTGGAGCTCTCTAGACGTGGTTTAACTAGTTTGCAAATATCTTAA 975 0.4205 MISNRRRVKQKRKKKKMMDEMTKNQPSHWWWLDTTTTNRSPWLQSTLSELNEKTKAMLKVIEEDADSFAKRAEMYYKKRPELLRMVEDFYRTHRSLAERYDQVRPETGIGLLNSGGSPFASAKHRFEKLLTFADDHRGYDTYSESYDVESEVDDPEQEVEEEEEESKSNHKEEVEVSYVAVNDEVIRLRDEMKRLNEENKAQKDQLKMKDSACDEVMMLREEIERLKEENEAQREQLKQKDEEKIEVIRQLSMAIDVMKEENVKMRNFIVAKESTKKWNKKPFEFNKFVGELSEKFFNFNFNVIPKNEPSVELSRRGLTSLQIS* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0834 324 MobiDBLite consensus disorder prediction 146 163 - -
Amo16g0834 324 Coils Coil 178 250 - -
Amo16g0834 324 MobiDBLite consensus disorder prediction 145 174 - -
Amo16g0834 324 Pfam KIP1-like protein 29 101 IPR011684 GO:0003779
Amo16g0834 324 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 27 107 IPR011684 GO:0003779
Amo16g0834 324 PANTHER PROTEIN NETWORKED 4A 27 302 - -
Amo16g0834 324 PANTHER PROTEIN NETWORKED 3A-RELATED 27 302 - -
Amo16g0834 324 MobiDBLite consensus disorder prediction 1 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0834 Amo-Chr16 13494029 13496491 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0834 - - ahf:112695853 556.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0834 16 13494029 13496491 Amo16g0834 16 13494029 13496491 ECH
Amo16g0834 16 13494029 13496491 Amo12g3033 12 118327664 118331508 PCT
Amo12g3033 12 118327664 118331508 Amo16g0834 16 13494029 13496491 PCT