Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g3033 ATGTTTCAAACTCCTCCTTCTTCATCACTGAGCGAGTCAGAGATAGACACTGACTCAGTGATATCTAAGAAGAGATTATCAAAGGAGAAGATGAGTGAAATTATGAAGAATCAAGGTTCACAATGGTGGTGGCTTGACACACACACCATCACTAGAAGATCTCAATGGCTTCAATCCACACTCAATGAACTGAATAAGAAGACACAGGCAATGCTCAAATTAATTGAACAAGATGCAGATTCATTCGCGCAACGCGCAGAGATGTATTACAAGAAGAGGCCAGAGCTTTTAAGCCTTGTTGAAGATTTCTATAAAACACATCGCTTGTTAGCCGAGCGGTACGATCAGGTCAGGCCGGACACTGGAGCTCGGCTACTGAAGGTTGGAGGGTCGCCTTTTGCCTCTCCAAGTTGTAAATTACAGAAGGCAGTGAGTTTTGCAGATAGTGGTTATGATGATAGCAATTCCGAGAGTTGTGATGTAGAGGACGAGTTTATGGAATCCGAAGTTGATGATCCTGAGCACGAGGATGATGTTCGTTCTGTGGCGTCAAGCGATAAAGTGATGATGAAGATAAAGAAAGAAATTCAGAACAAGGGTGATAAGGATCAAATCAAGAAGAAAGATTCCATTTGTGAAGAAATTGTGATGTTGAAGGAAGAAATCGAAAGACTCAAGGAAGAGAATAAAGCACAGAAGGATCAAATTAGGCAGAAAGATATAATCTGTGGTGAAGTAATGATGTTGAGGAGAGAAAACGAAAGATTCAGAGAAGAGAATCGAGTGCAGAAGGAAGAACTAAAGCAGAAAGGTAACTTGGTGTGCAAGGAAAAGATTGAGAGACTTGAAGAAGAGAATAGAGAACTTGTGGAGAAGCTTAAGCTGAAAGTTCCTGCCTGTGTTGAATTAATAGAGTTGAGAAAAGAAATTAGAAAACTAAAAGAAGAGAATAGAGCAAAGGAGGATCAAATCAACCAGAAAGATTCCGTTTGTGCTGAAATAACGGTGTTGAGGAAAGAAATACAAATTCTCAGAGAAGAGAATAGATCAAAGGAAGATCAACTGAAGCAGAAAGATAGCTTTCTTGACGAACTAATGGTGTTGAGTAAAGGATTTGGAGAAGAGAATCGGTTGTTGAAGGAAAAACTCGAGCTGAAAGATGCTATGTGTGATGAAGTTATGGTGTTGAGGAAAGAAATAGAAAGACTCAGAGAAGATAATAGAGAAAAGGAGGATCAACTCAAGCAGAAAAGTAGCATTTGTGATGAAGTAATGGTTTTGCAGAAAGAAATTGAAGGGCTCAGAGAAGAGAATAGAACAAAACAGGATCAGCTGAAGTACAAAGATGCAATTTGTATCAAAATAATGACTTTGAGTGAAGAAACAGAGAAACTCAGAGTAGAGAATATAGCTCTGAAGGATCTGCTAAAGAAGAAAGATAACATCTATGATGAAGTATCAGTGATGCTGAGGGAAGAAATTGAAGAACTTCAAATAGAGAATAAGACACAAAAGACTCATTTGAAGCAGAAAGATGAAGAGAAGATGGGAGTGATTAGGCACCTAAGTTTAGCAATAGATTTGCTTAAGCAAGAGAATGTGAAGATGAGAAGCTTCATTTCCAAGGAACTTGAAAAGAAATGGAACAACCCTTTTAATAAATTGTTCAATAGAGCCTCTAAGAATCAAACTAGTGTTATGCCAGTTTAG 1710 0.3836 MFQTPPSSSLSESEIDTDSVISKKRLSKEKMSEIMKNQGSQWWWLDTHTITRRSQWLQSTLNELNKKTQAMLKLIEQDADSFAQRAEMYYKKRPELLSLVEDFYKTHRLLAERYDQVRPDTGARLLKVGGSPFASPSCKLQKAVSFADSGYDDSNSESCDVEDEFMESEVDDPEHEDDVRSVASSDKVMMKIKKEIQNKGDKDQIKKKDSICEEIVMLKEEIERLKEENKAQKDQIRQKDIICGEVMMLRRENERFREENRVQKEELKQKGNLVCKEKIERLEEENRELVEKLKLKVPACVELIELRKEIRKLKEENRAKEDQINQKDSVCAEITVLRKEIQILREENRSKEDQLKQKDSFLDELMVLSKGFGEENRLLKEKLELKDAMCDEVMVLRKEIERLREDNREKEDQLKQKSSICDEVMVLQKEIEGLREENRTKQDQLKYKDAICIKIMTLSEETEKLRVENIALKDLLKKKDNIYDEVSVMLREEIEELQIENKTQKTHLKQKDEEKMGVIRHLSLAIDLLKQENVKMRSFISKELEKKWNNPFNKLFNRASKNQTSVMPV* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g3033 569 Coils Coil 246 266 - -
Amo12g3033 569 PANTHER PROTEIN NETWORKED 4A 458 564 - -
Amo12g3033 569 Coils Coil 303 354 - -
Amo12g3033 569 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 40 121 IPR011684 GO:0003779
Amo12g3033 569 Coils Coil 208 242 - -
Amo12g3033 569 Coils Coil 386 444 - -
Amo12g3033 569 Pfam KIP1-like protein 42 115 IPR011684 GO:0003779
Amo12g3033 569 Coils Coil 272 296 - -
Amo12g3033 569 Coils Coil 494 514 - -
Amo12g3033 569 PANTHER PROTEIN NETWORKED 3A-RELATED 458 564 - -
Amo12g3033 569 PANTHER PROTEIN NETWORKED 4A 40 313 - -
Amo12g3033 569 PANTHER PROTEIN NETWORKED 3A-RELATED 40 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g3033 Amo-Chr12 118327664 118331508 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g3033 - - adu:107475911 990.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g3033 12 118327664 118331508 Amo12g3033 12 118327664 118331508 ECH
Amo16g0834 16 13494029 13496491 Amo12g3033 12 118327664 118331508 PCT
Amo12g3033 12 118327664 118331508 Amo16g0834 16 13494029 13496491 PCT