Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0535 ATGGCTTCTCCATTTTCACTCCTCAATCTCATTAGCCTGTTGGTGTTGCTGTTTGTTCTGGGCTACACGGTAGAGTCACGTGACCCATTCGCGTGTGACCCAAACAACAGCAACACCAATGACTTGCCCTTCTGCAAGGCAAGTCTGCCTATAACGGAGAGGGTGAGGGACTTGATTGGGAGGCTGACGTTAGAGGAGAAGGTGGGGTTGCTGGTGGACAATGCGGCGGCGGTTCCGAGGCTTGGGATGAAAGGGTATGAGTGGTGGTCGGAGGCGCTTCATGGGGTGTCAAATGTGGGGCCCGGGACCAGGTTTGGTGGGGAGTTCCCTGGCGCCACCAGCTTCCCTCAAGTCATCACTACCGCCGCTTCCTTCAATGCCTCTTTGTGGGAGGCCATTGGACAGGTTGTCTCGGACGAAGCAAGGGCAATGTATAACGGAGGAACAGGTGGACTAACATACTGGAGCCCCAACGTGAACATCTTTAGGGACCCTAGGTGGGGCCGTGGACAAGAAACTCCCGGTGAGGACCCTGTCTTAGCCGGTAGATATGCTGCTAGTTATGTGAGGGGCCTACAAGGAGCAGACGGTAACCGGTTGAAGGTCGCTGCTTGCTGCAAACACTTCACCGCGTATGATCTTGATAATTGGAACGGTGTGGATCGCTTCCACTTTAACGCAGAGGTGAGCAAGCAGGACATAGAGGACACATTTGATGTGCCATTCAGGATGTGTGTGAAGGAAGGCAAAGTGGCGAGTGTGATGTGTTCTTACAATCAGGTGAATGGTGTCCCCACTTGCGCCGACCCCAATCTCCTCAAGAAAACGGTTCGTGCCCAATGGGGTCTTGATGGTTACATTGTATCTGATTGTGACTCTGTGGGAGTCTTCTATAGCAGCCAACACTATACTACAACGCCTGAAGAAGCTGCTGCCGATGCCATCAAAGCTGGTTTGGATTTGGATTGTGGTCCTTTCCTTGGGCTTCACACCCAGGATGCAGTAAAAAAGGGCTTGTTGGCTGAAGCCCATGTCAACGGTGCTCTAGCAAATATTCTTTCAGTCCAAATGAGGCTGGGCATGTTTGACGGAGAGCCATCGACCCAACCATATGGGAACCTGGGACCAAGAGATGTGTGCAGCCCGGCCCATCAACAACTAGCCCTTGAGGCCGCCACGCAAGGAATCGTACTCCTTAAGAATGATGGCCCATCTTTGCCTCTCTCCCCAAAGCGTCACCAAAACGTCGCTGTCATTGGGCCCAATTCTAATGTCACTGCCACAATGATCGGCAACTATGCGGGTATTGCTTGCGGGTACACAAGCCCCTTACAAGGAATTATGAGATATGCACAAACAGATTATCATATGGGTTGTGACAAAGTCGCTTGTATTGATGACAAGCAAATTGGGCCGGCTATAGAAGCAGCCCGTCAAGCAGATGCAACTGTTTTAATAATGGGCCTGGACCAATCAATTGAAGCTGAAACCGTTGACAGGGTTGGCTTGCTTTTACCGGGCCACCAACAAGATCTCATTTCAAAAGTAGCAGCAGCCTCAGGAGGCCCAACAATTTTGGTGTTAATGTCCGGTGGGCCTGTGGACATCACTTTTGCGAAGAACGATCCTCGAGTTTCTGCCATCTTATGGGCCGGGTATCCGGGCCAAGCCGGTGGCACCGCGATTGCGGATATCTTGTTTGGAAGTTCCAACCCAGGAGGTAAGCTGCCTATGACATGGTACCCACAAGAGTACCTTAGAAACTTGCCAATGACAAATATGGCAATGAGATCAAGCCCATCATACCCAGGAAGGACATACAGATTCTACAAGGGCCCAGTGGTGTACCCATTTGGACATGGGCTTACATACACCCATTTTGTTCATAGAGTAGCTAGTGCACCCAAATTGGTGTCAGTTCCAGTGGATGGACACCGCCGTACAAACAACACAAACTTGGGGAACAAGGCAATTAGAGTGACTCATGCACGGTGTGGGAAGCTCTCCATCACTATTCATGTGGACGTTAAAAATATGGGCTCAAGAGATGGCACTCACACAGTGTTAGTGTTCTCAGCTCCCCCTGCAGGGGGTGGTAATTGGGCTCCACAGAAGCAACTTGTGGGCTTCGAGAAAGTCCATGTCCCTGCACAGGCCCAACAGCAAGTCCAAATCAAGATCCACGTGTGCAAGCTGCTTAGTGTAGTGGACAAGTCCGGGATTAGGAGAATCCCAATGGGGGAACATAGTCTTCATATTGGTGATGATGTTAAGCACTCAATTTCACTTCAAGCACAAGCACTTGGGATTATTAAGTCTTAA 2322 0.506 MASPFSLLNLISLLVLLFVLGYTVESRDPFACDPNNSNTNDLPFCKASLPITERVRDLIGRLTLEEKVGLLVDNAAAVPRLGMKGYEWWSEALHGVSNVGPGTRFGGEFPGATSFPQVITTAASFNASLWEAIGQVVSDEARAMYNGGTGGLTYWSPNVNIFRDPRWGRGQETPGEDPVLAGRYAASYVRGLQGADGNRLKVAACCKHFTAYDLDNWNGVDRFHFNAEVSKQDIEDTFDVPFRMCVKEGKVASVMCSYNQVNGVPTCADPNLLKKTVRAQWGLDGYIVSDCDSVGVFYSSQHYTTTPEEAAADAIKAGLDLDCGPFLGLHTQDAVKKGLLAEAHVNGALANILSVQMRLGMFDGEPSTQPYGNLGPRDVCSPAHQQLALEAATQGIVLLKNDGPSLPLSPKRHQNVAVIGPNSNVTATMIGNYAGIACGYTSPLQGIMRYAQTDYHMGCDKVACIDDKQIGPAIEAARQADATVLIMGLDQSIEAETVDRVGLLLPGHQQDLISKVAAASGGPTILVLMSGGPVDITFAKNDPRVSAILWAGYPGQAGGTAIADILFGSSNPGGKLPMTWYPQEYLRNLPMTNMAMRSSPSYPGRTYRFYKGPVVYPFGHGLTYTHFVHRVASAPKLVSVPVDGHRRTNNTNLGNKAIRVTHARCGKLSITIHVDVKNMGSRDGTHTVLVFSAPPAGGGNWAPQKQLVGFEKVHVPAQAQQQVQIKIHVCKLLSVVDKSGIRRIPMGEHSLHIGDDVKHSISLQAQALGIIKS* 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0535 773 PANTHER SUGAR HYDROLASE-RELATED 9 769 IPR044993 GO:0009044|GO:0045493
Amo16g0535 773 PANTHER ALPHA-L-ARABINOFURANOSIDASE/BETA-D-XYLOSIDASE 9 769 - -
Amo16g0535 773 Pfam Fibronectin type III-like domain 686 756 IPR026891 -
Amo16g0535 773 Gene3D - 54 370 IPR036962 GO:0004553|GO:0005975
Amo16g0535 773 SUPERFAMILY (Trans)glycosidases 42 395 IPR017853 -
Amo16g0535 773 Pfam Glycosyl hydrolase family 3 C-terminal domain 396 624 IPR002772 GO:0004553|GO:0005975
Amo16g0535 773 Gene3D - 382 625 IPR036881 GO:0004553|GO:0005975
Amo16g0535 773 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 396 627 IPR036881 GO:0004553|GO:0005975
Amo16g0535 773 Pfam Glycosyl hydrolase family 3 N terminal domain 109 355 IPR001764 GO:0004553|GO:0005975
Amo16g0535 773 Gene3D Immunoglobulins 648 767 IPR013783 -
Amo16g0535 773 PRINTS Glycosyl hydrolase family 3 signature 115 134 IPR001764 GO:0004553|GO:0005975
Amo16g0535 773 PRINTS Glycosyl hydrolase family 3 signature 202 218 IPR001764 GO:0004553|GO:0005975
Amo16g0535 773 PRINTS Glycosyl hydrolase family 3 signature 276 294 IPR001764 GO:0004553|GO:0005975
Amo16g0535 773 SMART Fn3_like_2 686 757 IPR026891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0535 Amo-Chr16 8765700 8770667 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0535 7 773 Glycoside Hydrolase AT1G02640 72.445 0.0 1168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0535 - - gmx:100798630 1298.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0535 16 8765700 8770667 Amo16g0535 16 8765700 8770667 ECH
Amo16g0535 16 8765700 8770667 Amo09g0670 09 10886520 10897718 PCT
Amo09g0670 09 10886520 10897718 Amo16g0535 16 8765700 8770667 PCT