Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0670 CCAAAGCCTATTACATTCTCACACATTATCATCCATTTTTTTTCCCTCTCTTTATCTTCTCAAATGGCCTCCATTTTCTCACCCTCCACCGTCCCCGTCTTCCTTCTCCTCGTCCTCGTCCTATTGGGTCGTCTTGGCGAAGCGCGCGACCCGTTCGCCTGCGACCCAAATGACAGGGCCACAAAGAACTTGCCATTTTGCAAAGTTTCCCTGCCAATAAGGGTGAGGGTGAAGGACCTAATCGGGAGGCTAACACTACAAGAGAAGGTGACTCTGCTAGTGAACAATGCTGCTGCAGTTCCAAGGCTGGGGATCAAAGGGTATGAGTGGTGGTCGGAGGCGCTTCACGGCGTCTCCAATGTGGGCCCCGGAACAAAGTTCGGTGGCCCATTCCCTGCTGCCACTAGCTTCCCTCAAGTCATTACCACTGCTGCATCTTTCAATGCATCATTATGGGAAGAAATTGGCCGGGTGGTCTCAGACGAAGCAAGAGCAATGTACAACGGGGGCATGGCGGGCCTCACATATTGGAGCCCAAACGTCAACATATTCAGGGACCCTAGGTGGGGCCGCGGACAGGAGACTCCCGGTGAGGACCCTATTCTAGCCGGTACATATGCCGCCAGCTACGTCCGGGGGCTACAGGGAACAAACGGTAACCGGTTGAAGGTTGCTGCTTCTTGCAAACACTTCACGGCTTATGACTTGGATAATTGGAACGGCATTGATCGCTTTCACTTTAACGCGCAGGTTAGCAAGCAGGATATAGAGGACACATTCGATGTTCCATTCAGGATGTGTGTGAAGGAAGGCAAAGTGGCAAGTGTTATGTGTTCATACAATCAGGTGAATGGTGTTCCTACTTGTGCTGATCCCAACCTCTTAAAAGGAAGAGTTAGGGGCCAATGGCGTCTAAATGGGTACATTGTATCAGATTGTGACTCTGTTGGGGTGTTTTATACCAATCAGCATTATACGTCAACACCAGAAGAAGCTGCTGCAGATGCCATCAAGGCAGGGTTGGATCTAGATTGTGGGCCATTTCTAGCAGTACATACAGAGAAGGCATTAGAAAAAGGGTTAGTAACGGAAGGTGACGTTAACGGCGCATTGGCGAACACAATAACAGTACAGATGAGGCTAGGAATGTTCGATGGGGAGGCATCAGCGCAGCCATATGGGAAGTTGGGTGCGAGAGATGTGTGCACAGCAGCTCACAAAGAGCTTGCAGTTGAAGCAGCGAGACAAGGGATTGTGCTACTTAAGAACCGTGGTCCCTCGTTGCCCCTCTCTCCAAGGCGTCATCAAACTGTTGCTGTCATTGGACCCAACTCTAATGTCACTGTTACCATGATTGGTAACTATGCTGGTATTGGTTGTGAGTACACAAGTCCCTTGCAAGGAATAGGAAGATACGCCAAGACTATTCATGAGCTTGGTTGTACAAATGTTGCTTGTTCCAATGACAAGCAGTTTGGGTCAGCACTAAACGCTGCCCGTCAAGCAGATGCAACGGTTCTAGTAATTGGCCTTGACCAGTCTATTGAGGCTGAAACTGTTGACAGAGTTGGCCTACTTCTTCCTGGGCATCAACAAGAGCTTGTCTCAAAGGTTGCAGCAGCTTCAAGAGGCCCAACAATTTTGGTCTTGATGTCTGGTGGGCCTGTTGATGTAACTTTTGCTAAGAATGATCCGAAAATTGCGGGTATATTGTGGGCTGGGTATCCGGGCCAAGCTGGTGGTGCAGCCATTGCAGATATCTTGTTTGGTGCTGCCAATCCAGGAGGCAAGCTTCCAATGACATGGTATCCAGAAGAGTACCTTAAGAGCTTAGCAATGACAGATATGGCAATGCGTCCAAGACGAAGCAAAGGGTACCCTGGAAGAACCTATCGATTTTACAACGGTCCAGTTGTGTACCCTTTTGGTTACGGATTATCCTACTCTCACTTTCTTCACACTCTCGCTAGCGCGCCAAAGACGGTCTCAGTTCCTGTTCATGGCCACCGCCATGGAAACACCACAAACATCTCTAATAAAGCAATTAGAGTGAGACATGCACGATGCGGCAAGCTCTCAGTTAGCCTCCACATTGATGTCAAGAATGTTGGCTCCAAAGATGGCTCTCACACGCTCTTAGTGTTCTCGGCGCCCCCGGCCGGTAATGGCCACTGGGCGCCGCACAAGCAGTTGGTAGCGTTTGAGAAGGTCCGTGTTCCTGCTAAGTCGCAGCAGCGAGTCAAGATTAATATTCATGTTTGCAAGCTTTTGAGTGTGGTTGATAGGTCTGGGACAAGAAGAATTCCAATGGGGGTGCATAATCTTCACATTGGTGATGTTAAACATTCGTTGTCCGTACAAGCAGAAACACTTGGGATTATCAAGTCCTAA 2391 0.4918 PKPITFSHIIIHFFSLSLSSQMASIFSPSTVPVFLLLVLVLLGRLGEARDPFACDPNDRATKNLPFCKVSLPIRVRVKDLIGRLTLQEKVTLLVNNAAAVPRLGIKGYEWWSEALHGVSNVGPGTKFGGPFPAATSFPQVITTAASFNASLWEEIGRVVSDEARAMYNGGMAGLTYWSPNVNIFRDPRWGRGQETPGEDPILAGTYAASYVRGLQGTNGNRLKVAASCKHFTAYDLDNWNGIDRFHFNAQVSKQDIEDTFDVPFRMCVKEGKVASVMCSYNQVNGVPTCADPNLLKGRVRGQWRLNGYIVSDCDSVGVFYTNQHYTSTPEEAAADAIKAGLDLDCGPFLAVHTEKALEKGLVTEGDVNGALANTITVQMRLGMFDGEASAQPYGKLGARDVCTAAHKELAVEAARQGIVLLKNRGPSLPLSPRRHQTVAVIGPNSNVTVTMIGNYAGIGCEYTSPLQGIGRYAKTIHELGCTNVACSNDKQFGSALNAARQADATVLVIGLDQSIEAETVDRVGLLLPGHQQELVSKVAAASRGPTILVLMSGGPVDVTFAKNDPKIAGILWAGYPGQAGGAAIADILFGAANPGGKLPMTWYPEEYLKSLAMTDMAMRPRRSKGYPGRTYRFYNGPVVYPFGYGLSYSHFLHTLASAPKTVSVPVHGHRHGNTTNISNKAIRVRHARCGKLSVSLHIDVKNVGSKDGSHTLLVFSAPPAGNGHWAPHKQLVAFEKVRVPAKSQQRVKINIHVCKLLSVVDRSGTRRIPMGVHNLHIGDVKHSLSVQAETLGIIKS* 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0670 796 Pfam Glycosyl hydrolase family 3 N terminal domain 132 370 IPR001764 GO:0004553|GO:0005975
Amo09g0670 796 PRINTS Glycosyl hydrolase family 3 signature 137 156 IPR001764 GO:0004553|GO:0005975
Amo09g0670 796 PRINTS Glycosyl hydrolase family 3 signature 298 316 IPR001764 GO:0004553|GO:0005975
Amo09g0670 796 PRINTS Glycosyl hydrolase family 3 signature 224 240 IPR001764 GO:0004553|GO:0005975
Amo09g0670 796 Pfam Glycosyl hydrolase family 3 C-terminal domain 418 648 IPR002772 GO:0004553|GO:0005975
Amo09g0670 796 SMART Fn3_like_2 710 781 IPR026891 -
Amo09g0670 796 PANTHER ALPHA-L-ARABINOFURANOSIDASE/BETA-D-XYLOSIDASE 25 792 - -
Amo09g0670 796 Gene3D - 76 392 IPR036962 GO:0004553|GO:0005975
Amo09g0670 796 PANTHER SUGAR HYDROLASE-RELATED 25 792 IPR044993 GO:0009044|GO:0045493
Amo09g0670 796 SUPERFAMILY (Trans)glycosidases 64 417 IPR017853 -
Amo09g0670 796 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 418 651 IPR036881 GO:0004553|GO:0005975
Amo09g0670 796 Pfam Fibronectin type III-like domain 712 779 IPR026891 -
Amo09g0670 796 Gene3D - 404 649 IPR036881 GO:0004553|GO:0005975
Amo09g0670 796 Gene3D Immunoglobulins 672 793 IPR013783 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0670 Amo-Chr9 10886520 10897718 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g0670 34 796 Glycoside Hydrolase AT1G02640 71.838 0.0 1156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0670 - - gmx:100798630 1354.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0535 16 8765700 8770667 Amo09g0670 09 10886520 10897718 PCT
Amo09g0670 09 10886520 10897718 Amo16g0535 16 8765700 8770667 PCT