Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0426 ATGGCAGAAGAGGCAGAGAACGAACGGAGGGTTCTGGTAGCAGTGGACGAAGGCGATGAGAGCATGTATGCCCTCTCATGGTGCCTCAACAACCTCGTCTTCCAAAATTCCAAAAATACCCTTATCCTTCTCTATGTAAACCCACCACGTGGCGGTTATATGCCCTTTGAAACCGCAGCCGCACTAGATGATCCTGAAACTCATCCAGCAAATCTGTATTCGCCGGAAATAACGGCAGCCATGGAAAGATATAGCCAAGAAGTGGCAGATTGCGTGTTAGCGAAAGCCAAGAAATTGTGTAAAGATCTCCAACACGTTAAGGTGGAGACGAGAGTAGAGGATGGCGATCCAAGGGACGTGATTTGTGAGATGGCTGAAAAGTTGGGTGCTCATGTTCTTGTTATGGGAAGCCACGGTTATGGTCTTATCAAGAGGACTTTTCTTGGAAGTGTGAGCAGTCACTGCGCACAGAACGTTAAGTGCCCAGTTCTCATAGTCAAGAAGCCAAAATCAATTGCTGATGCTGGAGACGAAACATATCAATCGGAATAA 552 0.4692 MAEEAENERRVLVAVDEGDESMYALSWCLNNLVFQNSKNTLILLYVNPPRGGYMPFETAAALDDPETHPANLYSPEITAAMERYSQEVADCVLAKAKKLCKDLQHVKVETRVEDGDPRDVICEMAEKLGAHVLVMGSHGYGLIKRTFLGSVSSHCAQNVKCPVLIVKKPKSIADAGDETYQSE* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0426 183 CDD USP_Like 10 166 - -
Amo16g0426 183 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 1 172 - -
Amo16g0426 183 Gene3D HUPs 3 178 IPR014729 -
Amo16g0426 183 PRINTS Universal stress protein signature 8 26 IPR006015 -
Amo16g0426 183 PRINTS Universal stress protein signature 127 139 IPR006015 -
Amo16g0426 183 PRINTS Universal stress protein signature 145 167 IPR006015 -
Amo16g0426 183 Pfam Universal stress protein family 9 167 IPR006016 -
Amo16g0426 183 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 9 169 - -
Amo16g0426 183 PANTHER OS05G0357525 PROTEIN 1 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0426 Amo-Chr16 6851716 6854298 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0426 - - adu:107492166 268.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0426 16 6851716 6854298 Amo16g0426 16 6851716 6854298 ECH
Amo16g0426 16 6851716 6854298 Amo19g1543 19 35181824 35183240 PCT
Amo16g0426 16 6851716 6854298 Amo09g0965 09 19254307 19255927 PCT
Amo19g1543 19 35181824 35183240 Amo16g0426 16 6851716 6854298 PCT
Amo09g0965 09 19254307 19255927 Amo16g0426 16 6851716 6854298 PCT