Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0296 ATGGATCATATTAGTAATGAGGCTCGAGTTGACCGTTTTCGAATTGGCCCTTCCGGCATACTTGGTAGGACGGTTGCTTATAGGGTTCTTTTCTGCAAGTCTATGTCAGAATTGAGGCACCGAATAGTTCATGTATTGTTGCATCTAATTTTTAGGTTTAAGGGATTTTTTGCACCCATTTTGTCATGGTTTCATCCAAGAAACCCTCAGGGGATATTAACAATGATGACAATACTTGCTTTCTTGTTGAAACGATATACTAATGTAAGGGCAAGTGCTGAACTAGTGTATAGGAGGAAGTTCTGGAGGAATATGATGAGATCTGCCTTGACTTATGAGGAGTGGGCTCATGCAGCTAAGATGCTCGATAAAGCGACTCAAAAGATGAATGAATCCGATCTTTATGATGTGGAATTGGTGAGGAACAAGCTCCAAGAGCTGCGCCACCGCCGGCAAGAGGGGTCTCTCAGAGACATAATATTTTGTATGCGTGCTGATCTTATTAGGAATCTAGGTAATATGTGTAACCCCGAGCTCCACAAGGGTAGGCTTCATGTGCCTGCCTTAATCAAGGAGTACATTGATGAAGTATCAACTCAGCTCAGAATGGTATGTGACTCTGATTCAGAGGAGCTCTCATTGGAAGAAAAGCTTGCGTTCATGCACGAAACTAGACACGCTTTTGGGAGGACGGCTTTGTTGTTAAGTGGGGGTGCTTCTCTTGGAGCATTCCATGTGGGTGTTGTACAAACACTTGTAGAACATAAACTATTGCCTAGGATAATTGCTGGTTCTAGTGTGGGATCCATAATGTGTGCTGTTGTTGCCACTAGGTCTTGGCCTGAACTTCAAAGCTTCTTTGAGGATTCGTGGCATGCGTTGAAGTTTTTCGACCAAATGGGTGGGATTTTCACAGTTGTCAAGAGGGTTACAACATTTGGCGCTCTTCATGAGATCAGACAATTGCAAATAATGTTGAGGCATCTGACAAGCAATCTTACATTTCAAGAGGCTTATGACATGACAGGTAGAATTCTTGGGATTACAGTTTGCTCCCCGAGGAAGCATGAACCACCAAGATGTCTTAACTACTTGACTTCGCCGCACGTTGTCATATGGAGTGCAGTCACTGCTTCTTGTGCTTTTCCTGGCCTTTTTGAGGCTCAGGAATTGATGGCAAAGGATAGAAGTGGTGAGATTGTTCCTTACCATCCTCCTTTCAATTTGGGTCCTGAGGAGGGATCCACTTCAGCGCGCCGATGGAGAGATGGTAGCTTGGAGGTTGATTTACCAATGATTCAGTTGAAAGAGCTGTTCAATGTCAATCACTTTATAGTCAGTCAGGCTAATCCTCATATTGCACCCTTGCTAAGGTTGAAAGAATTTGTGAGAAATTATGGAGGCAATTTCGCTGCTAAGCTTGCTCATCTTGCGGAGTTGGAAGTGAAACACAGGTGCAATCAAATACTTGAACTTGGCTTTCCATTAGGTGGACTTGCCAAGTTGTTTGCTCAAGACTGGGAAGGCGATGTTACTGTTGTTATGCCTGCAACTCTTGCTCAGTACTCAAAAATCATACAGAACCCTTCGTATGCGGAGCTTCAGAAGGCAGCCAACCAAGGGAGAAGATGCACCTGGGAGAAGCTTTCAGCCATAAAAGCAAACTGTGGAATCGAGCTTGCTCTGGATGAATGTGTTGCAGTTCTGAATCATATGAGAAGACTCAAAAGAAGCGCACAGAGAGCTGCTGCTTCTGCTTCTCACGGTTTATCCAGCAACAACAGATTCAATGCTTCAAGAAGAATCCCTTCATGGAATTGCATTGCACGAGAGAATTCAACAGGTTCCCTTGAAGACCTTACAGATGCTGCTTCCCCAGTGCATCAAGGTGTTAGTTGTTCCAATGGAGGCAATGGTAAAAACTGGAAGACCCACCGTGGCGCACATGATGGAAATGACAGTGATTCTGAAAGTGTTGATTTGAATACATGGACCAGATCTGGAGGCCCTTTGATGAGAACTACTTCTGCGAATAAGTTCGTCGACTTTCTCCGCAGCCTGGATGCTGATTCAGAGCAAAATAAAGGCCTGATGGCTCATTCTAACCCTCATGATTTCCAATATCACAGTCCTAGAAACACACCACCAGATTGTAGCTTTGATAGCGCAGAATCCGATCAGAAGGAACAAATCGGTAATAGGTTTGTTAACGGTTCTAGCATAGTGGTAAATGAAGGTGACCTTTTGCAGCCTGAAAGGATACATAATGGGTTTGTGTTCAATATTGTCAAGAAAGAAGAGTTAACACATTCAAATCGGTGTCATGATTTTGAAAATTACAGCAATGAAGCTGCTGAGAGTGTCCAAATTGAGTCTCCAGAAAAGGATATGGATGCTGCAAGCTCATCTTCTGAAAGTGGAGATGATGATCCTTTGGCAGCTAGGTCCCTAACTTAG 2457 0.4371 MDHISNEARVDRFRIGPSGILGRTVAYRVLFCKSMSELRHRIVHVLLHLIFRFKGFFAPILSWFHPRNPQGILTMMTILAFLLKRYTNVRASAELVYRRKFWRNMMRSALTYEEWAHAAKMLDKATQKMNESDLYDVELVRNKLQELRHRRQEGSLRDIIFCMRADLIRNLGNMCNPELHKGRLHVPALIKEYIDEVSTQLRMVCDSDSEELSLEEKLAFMHETRHAFGRTALLLSGGASLGAFHVGVVQTLVEHKLLPRIIAGSSVGSIMCAVVATRSWPELQSFFEDSWHALKFFDQMGGIFTVVKRVTTFGALHEIRQLQIMLRHLTSNLTFQEAYDMTGRILGITVCSPRKHEPPRCLNYLTSPHVVIWSAVTASCAFPGLFEAQELMAKDRSGEIVPYHPPFNLGPEEGSTSARRWRDGSLEVDLPMIQLKELFNVNHFIVSQANPHIAPLLRLKEFVRNYGGNFAAKLAHLAELEVKHRCNQILELGFPLGGLAKLFAQDWEGDVTVVMPATLAQYSKIIQNPSYAELQKAANQGRRCTWEKLSAIKANCGIELALDECVAVLNHMRRLKRSAQRAAASASHGLSSNNRFNASRRIPSWNCIARENSTGSLEDLTDAASPVHQGVSCSNGGNGKNWKTHRGAHDGNDSDSESVDLNTWTRSGGPLMRTTSANKFVDFLRSLDADSEQNKGLMAHSNPHDFQYHSPRNTPPDCSFDSAESDQKEQIGNRFVNGSSIVVNEGDLLQPERIHNGFVFNIVKKEELTHSNRCHDFENYSNEAAESVQIESPEKDMDAASSSSESGDDDPLAARSLT* 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0296 818 PANTHER NEUROPATHY TARGET ESTERASE/SWISS CHEESE D.MELANOGASTER 1 712 - -
Amo16g0296 818 Pfam Domain of unknown function (DUF3336) 98 226 IPR021771 GO:0004806|GO:0006629
Amo16g0296 818 MobiDBLite consensus disorder prediction 695 727 - -
Amo16g0296 818 Pfam Patatin-like phospholipase 233 411 IPR002641 GO:0006629
Amo16g0296 818 MobiDBLite consensus disorder prediction 695 721 - -
Amo16g0296 818 MobiDBLite consensus disorder prediction 780 818 - -
Amo16g0296 818 SUPERFAMILY FabD/lysophospholipase-like 229 575 IPR016035 -
Amo16g0296 818 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 233 436 IPR002641 GO:0006629
Amo16g0296 818 Gene3D Cytosolic phospholipase A2 catalytic domain 229 307 - -
Amo16g0296 818 PANTHER TRIACYLGLYCEROL LIPASE-RELATED 1 712 - -
Amo16g0296 818 CDD Pat_SDP1-like 163 570 - -
Amo16g0296 818 Gene3D Cytosolic phospholipase A2 catalytic domain 308 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0296 Amo-Chr16 4462655 4466546 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0296 1 803 Acyl Lipid Metabolism Gene Families AT5G04040 73.652 0.0 1212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0296 K14674 - gmx:100791261 1339.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0296 16 4462655 4466546 Amo16g0296 16 4462655 4466546 ECH
Amo16g0296 16 4462655 4466546 Amo12g1657 12 77387589 77392129 PCT