Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g1657 ATGGATCGTATAAGTAATGAGGCTACTGTTGAGGTTTTCCCAATTGGCCCTGCGACCATTTTTGGCAGAGCAATTGCATTTAGGGTTCTTATGTGCAAATCTATGTCACATTTGAGGCATCAGCAACTATTGATATTGGTGGATACCTTCCGAAGGGTTAGGGGATTTTGGGTACCAGTTATATCATCATTTCATCCTAGGAATCCTCAGGGGTTATTAGCAATGATCACAATTGTTGCATTCTTGTTGAGACGGTATGCGAGTGTGAGGGTAACGGCCGAGTTGGCCTATAGAAGGAAATTCTGGAGTAATATGATGCGAGCCGCGTTGACTTATGAGGAATGGGCTCATGCAGCTAAGATGCTTGATAAAGAGACACCAAGGATGAATGAAGAGGACCTGTATGATGTAGAATTGGTGAGCAATAAGCTTCAAGAGCTTCGCCAGCGCCGGCATGAGGGATCTCTAAGGGATATTATATTTTGTATGAGAGCTGATCTTGTTAGAAATCTAGGTAATATGTGTAATCCTGCTCTCCATAAAGGCAGGCTTCAGGTGCCGAGATTGATCAAGGAGTACATTGATGAGGTATCAACTCAGTTGAGAATGGTGTGTGACTCTGATTCGGAGGAGCTTTCATTGGAAGAGAAGCTCGCATTCATGCACGAAACGAGACATGCGTTTGGGAGGACGGCTTTGCTGTTAAGTGGGGGTGCTTCCCTTGGAGCTTTTCATGTTGGTGTTGTTAAAACTCTGGTAGAACATAAACTTATGCCTAGGATAATTGCTGGTTCCAGTGTAGGATCGATTATATGTGCTGTAGTTGCCACTAGATCTTGGCCTGAGCTTCAAAGCTTTTTTGAGGATTCGTTACACTCATTGCAGTTTTTCGATCAAATGGGTGGGATTTTTAGTGTTGTGAAGAGGGTCACAACATTAGGTGCAGTTCATGAGATCAGACAGTTGCAAATGATGTTGAGGCATCTAACCAGCAATCTTACATTTCAAGAAGCTTATGACATGACGGGTCGCATTCTTGGAATTACTGTTTGCTCTCCAAGAAAGCATGAGCCACCTAGATGCCTTAACTACTTGACTTCACCTAATGTTGTAATATGGAGTGCGGTCACTGCTTCTTGTGCCTTTCCTGGGCTTTTCGAGGCACAGGAATTGATGGCGAAGGATAGAAGTGGACAGATTGTACCTTACCATCCTCCATTTAATCTGGGTCCTGAAGAGGGATCATCATCAGCACGGCGATGGAGGGATGGTAGCTTGGAGATGGATTTGCCAATGATGCAGTTGAAAGAGCTGTTCAATGTCAATCATTTTATAGTTAGTCAGGCCAATCCTCATATTTCACCATTGTTGAGGATGAAAGAGTTTGTGCGAGCTTACGGAGGTAACTTCGCTGCCAAGCTTGCTCATCTTGTGGAGATGGAGGTGAAACATAGATGTAATCAGATACTTGAGCTCGGATTTCCCTTAGGTGGAATTGCCAAGCTGTTTGCTCAAGAGTGGGAGGGTGATGTAACTGTTGTTATGCCTGCAACTCTTGCTCAGTACTCGAAAATTATACAGAATCCTTCATATATGGAACTTCAAAAGGCAAACAACCAAGGGAGAAGATGCACCTGGGAGAAGCTTTCGGCCATAAAAGCTAATTGCGGAATTGAGCTTGCTCTTGATGAGTGTGTTGTAATGCTCAATCATATGAGAAGACTCAAACGAAGTGCTGCAAGAGCGGCAGCTGCTGTTTCTTCTCAAGGTTCCGGTTTTCCCCCAGCTGTCAAGTTCTGTGGTGCAAAAAGAATTCCTTCATGGAATGTTATTGCACGAGAAAATTCAACAGGATCCCTTGAAGATCTTATTCTAGGTGCTAACGGTCCCAATGAAACCTCCGGTAAAAATTGGAAGTCCAACCGTAGCGCATATGATGGAAGTGACTGCGAATCTGAATGTAGTGACTCAAATTCTTGGACAAGAACTGGGGGGCCTTTAATGAGAACTACTTCGTCCAATCTGTTCATTGACTTCGTCCAGCACTTAGAAATCGATATTGAACCAAGTTCAAGCATGCCAGGTCGTACTACGCCTCACGATTTTCAATATCACAGTCCCAGGGTGACAACACCGGATAGGAGCTCCCCAGAATCTGACCAGAGGGAAAACGGCAACAAGGTTTTCACGAATGGATCTAGCATAATGGTAACTGAAGGCGATCTTTTGCAGCCTGAAAGGATCCATAATGGGATTGTGTTCAATGTTATCAAGAAAGAAGACTTGTCACCTTCAAGTAGGAGTCATGATAGTTTTAGCAATGAAGTCGCCGAGTCTGTCCAAATTTATTGTCCAGGGAAGGAGATGGACACTGCTAGCACAGTTTCGGATTCCGAAAATGGCGACAATGAAACAATTCTCCCAGACAACAACTCCGAAATTGATTCCAGTGCCGATTTGGGTAAGGATAAAACCGTTGCTGACCATTAA 2490 0.4394 MDRISNEATVEVFPIGPATIFGRAIAFRVLMCKSMSHLRHQQLLILVDTFRRVRGFWVPVISSFHPRNPQGLLAMITIVAFLLRRYASVRVTAELAYRRKFWSNMMRAALTYEEWAHAAKMLDKETPRMNEEDLYDVELVSNKLQELRQRRHEGSLRDIIFCMRADLVRNLGNMCNPALHKGRLQVPRLIKEYIDEVSTQLRMVCDSDSEELSLEEKLAFMHETRHAFGRTALLLSGGASLGAFHVGVVKTLVEHKLMPRIIAGSSVGSIICAVVATRSWPELQSFFEDSLHSLQFFDQMGGIFSVVKRVTTLGAVHEIRQLQMMLRHLTSNLTFQEAYDMTGRILGITVCSPRKHEPPRCLNYLTSPNVVIWSAVTASCAFPGLFEAQELMAKDRSGQIVPYHPPFNLGPEEGSSSARRWRDGSLEMDLPMMQLKELFNVNHFIVSQANPHISPLLRMKEFVRAYGGNFAAKLAHLVEMEVKHRCNQILELGFPLGGIAKLFAQEWEGDVTVVMPATLAQYSKIIQNPSYMELQKANNQGRRCTWEKLSAIKANCGIELALDECVVMLNHMRRLKRSAARAAAAVSSQGSGFPPAVKFCGAKRIPSWNVIARENSTGSLEDLILGANGPNETSGKNWKSNRSAYDGSDCESECSDSNSWTRTGGPLMRTTSSNLFIDFVQHLEIDIEPSSSMPGRTTPHDFQYHSPRVTTPDRSSPESDQRENGNKVFTNGSSIMVTEGDLLQPERIHNGIVFNVIKKEDLSPSSRSHDSFSNEVAESVQIYCPGKEMDTASTVSDSENGDNETILPDNNSEIDSSADLGKDKTVADH* 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g1657 829 SUPERFAMILY FabD/lysophospholipase-like 229 575 IPR016035 -
Amo12g1657 829 PANTHER NEUROPATHY TARGET ESTERASE/SWISS CHEESE D.MELANOGASTER 1 710 - -
Amo12g1657 829 PANTHER TRIACYLGLYCEROL LIPASE-RELATED 1 710 - -
Amo12g1657 829 MobiDBLite consensus disorder prediction 689 731 - -
Amo12g1657 829 Gene3D Cytosolic phospholipase A2 catalytic domain 230 310 - -
Amo12g1657 829 Pfam Patatin-like phospholipase 233 431 IPR002641 GO:0006629
Amo12g1657 829 Pfam Domain of unknown function (DUF3336) 97 226 IPR021771 GO:0004806|GO:0006629
Amo12g1657 829 MobiDBLite consensus disorder prediction 691 714 - -
Amo12g1657 829 CDD Pat_SDP1-like 163 570 - -
Amo12g1657 829 MobiDBLite consensus disorder prediction 791 815 - -
Amo12g1657 829 MobiDBLite consensus disorder prediction 783 829 - -
Amo12g1657 829 Gene3D Cytosolic phospholipase A2 catalytic domain 311 488 - -
Amo12g1657 829 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 233 436 IPR002641 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g1657 Amo-Chr12 77387589 77392129 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g1657 4 793 Acyl Lipid Metabolism Gene Families AT5G04040 73.259 0.0 1186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g1657 K14674 - gmx:100791261 1244.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g1657 12 77387589 77392129 Amo12g1657 12 77387589 77392129 ECH
Amo16g0296 16 4462655 4466546 Amo12g1657 12 77387589 77392129 PCT