Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0292 ATGGGATCCGAAAGAGGGTCTCCATTTTATGTGGTTGACTTGAGAGATGAAAACATGAAGGCGGGCAGCGAGGCATGGCGGTCGGCGTGCCGTGTGGTGAGGACTGCGCTGGAGGAGCACGGCTGCTTCGTGGCGCGGTTCGACAAGGTTAGCCACGAGCTTTGCAACTCCGTTGTGACGTCTTTGAAGCAACTGTTTAGCCTGCCATTGGAGCTCAAGAAACAAAAGACAAATGATAAGCCATTACATGGCTACATAGGAAGTGTGCCATGGCTTCCATTGTATGAATCTATCGGCATTGATAATCCTTTGTCCATGGATGCAGTGCAAAATTTCGCGCACTTTATGTGGCCCCATGGAAACCATACTTTTTGTGAAAGCATCAATGAGTATGCGAAAGTGATGGCAGAATTAGAGGTAGTGGCAAGGAGAATGGTGTTTGAGAGCTATGGTATGAAGATGGAACGATACGAATCATTGATAGAAGAAACAAGCGAGTATGTGTTTCGTTGCTTGGAGTACAAGCCACGAAGCGAGGGCGTAGATGAGAATGTGTTAGGGTTGGAGCCTCACACTGACTTGTCAATCATATCAGTGCTTCATCCCATTAACAATCTCAATGGCTTGCAAGTTAAGACCAGCCATGTTTCTGATGATCAAGAACAATGGACACCCATTGAAGCCTCCCCCAACTCCTTTGTCGTCATGGCTGGTGACGCACTCCAGGTGTGGAGTAATGGAAGGATAAAATCATGTTTACACAGAGTAGAAATGAAGGAGAAGAAAGCAAGATACGCAACAGGAATATTCTCATTTTGTGGCAACATATTGGAGATACCAGAGGAAATAATGGTTGATGAACAACACCCCTTGCGTTACAAACCAGCATTCCACCATTATGATTACCTTCGATTCTTTGACCAGCACAGAATCAGACAACCTCAAACTCGAATAAATGCCTATTGTGGAATATAA 975 0.4523 MGSERGSPFYVVDLRDENMKAGSEAWRSACRVVRTALEEHGCFVARFDKVSHELCNSVVTSLKQLFSLPLELKKQKTNDKPLHGYIGSVPWLPLYESIGIDNPLSMDAVQNFAHFMWPHGNHTFCESINEYAKVMAELEVVARRMVFESYGMKMERYESLIEETSEYVFRCLEYKPRSEGVDENVLGLEPHTDLSIISVLHPINNLNGLQVKTSHVSDDQEQWTPIEASPNSFVVMAGDALQVWSNGRIKSCLHRVEMKEKKARYATGIFSFCGNILEIPEEIMVDEQHPLRYKPAFHHYDYLRFFDQHRIRQPQTRINAYCGI* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0292 324 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 164 274 IPR005123 -
Amo16g0292 324 Pfam 2OG-Fe(II) oxygenase superfamily 174 267 IPR044861 -
Amo16g0292 324 SUPERFAMILY Clavaminate synthase-like 11 309 - -
Amo16g0292 324 Gene3D - 10 322 IPR027443 -
Amo16g0292 324 Pfam non-haem dioxygenase in morphine synthesis N-terminal 13 87 IPR026992 -
Amo16g0292 324 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 9 323 - -
Amo16g0292 324 PANTHER 2-OXOGLUTARATE-DEPENDENT DIOXYGENASE 9 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0292 Amo-Chr16 4412798 4415202 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0292 126 294 Glycosyltransferase AT5G59530 27.011 2.47e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0292 - - gmx:100775440 399.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo02g1783 02 55903761 55906771 Amo16g0292 16 4412798 4415202 PCT