Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g1783 ATGGGATCCCAAACACAGTTTAATAATTCTCATCCCTCGTTACCACTAATAGACTTCACAACCGAAAATCTGAACCCTGGTAGTGACTCTTGGGTTTCAACATGCCAAGTTGTGCGTACAGCGCTTGGCGATCATGGTGGTTTTCTCGCACTGTATGACGAAGTTGATTCAGAGGTTTATGACTCTGTTTACTCTGCAATGGAACAACTGTTTGATCTTCCAATTGAAACTAAAAGGAAGAGCACCACTGAGAAGCCTATATTTAGTTATTCTGGTCAACTCTCTAGAATACCCTTGTATGAATCTGTGGGTATCGTGGATCCGCTCAGCGTAGATCAGTGTCGAAAGTTTACCCATGTTATGTGGCCTCAAGGGAATGATCATTTCTGCAAAAGTGTCCATTCCTATGCAAAGCAATTACAAGGACTAGACCACGTTGTGAAAAGAATGTTGTTTGAAAGCTATGGACTGGAGAACAAGAAATTAGAATGTTTACTGGATTCAACTGATTATGTGCTCAGAAGTTACAAGTACAGAACACCAAAAGTTGGTGAAAGCAACTTGGGAGTGGCTCCTCATTCAGACACAGCTTTCCTAACGATACTAAATCAGAAGGTAGAAGGCTTGGGGGTTAAGCTCAAGAATGGGGAATGGTTTGAAGTTGGTGTTTCATCCTCTTTGTATTTGGTTATGGGTGGTGATGCATTGCAGGTGTGGAGTAATGACAGAATACCTGCTTGTGAACACCGTGTCTTGGTAAACTCAAAGATAGATAGATACTCTACGGGGCTGCTTTCATATGTTAATAACATAATGGAACCACAAGAGGAGCTTGTTGATGAGGAAAACCCTCTTTGTTACAAGCCTTTTGACCATTACGGGTACCTCCGTTTCTTTCTCTCAGAAGAAGCTCTGAAATCTACTTCACGTATTAAAGCATATTGTGGAATCTAA 954 0.413 MGSQTQFNNSHPSLPLIDFTTENLNPGSDSWVSTCQVVRTALGDHGGFLALYDEVDSEVYDSVYSAMEQLFDLPIETKRKSTTEKPIFSYSGQLSRIPLYESVGIVDPLSVDQCRKFTHVMWPQGNDHFCKSVHSYAKQLQGLDHVVKRMLFESYGLENKKLECLLDSTDYVLRSYKYRTPKVGESNLGVAPHSDTAFLTILNQKVEGLGVKLKNGEWFEVGVSSSLYLVMGGDALQVWSNDRIPACEHRVLVNSKIDRYSTGLLSYVNNIMEPQEELVDEENPLCYKPFDHYGYLRFFLSEEALKSTSRIKAYCGI* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g1783 317 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 168 274 IPR005123 -
Amo02g1783 317 PANTHER 2-OXOGLUTARATE-DEPENDENT DIOXYGENASE 11 316 - -
Amo02g1783 317 SUPERFAMILY Clavaminate synthase-like 7 302 - -
Amo02g1783 317 Pfam 2OG-Fe(II) oxygenase superfamily 183 261 IPR044861 -
Amo02g1783 317 Pfam non-haem dioxygenase in morphine synthesis N-terminal 14 92 IPR026992 -
Amo02g1783 317 Gene3D - 2 306 IPR027443 -
Amo02g1783 317 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 11 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g1783 Amo-Chr2 55903761 55906771 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g1783 14 288 Glycosyltransferase AT5G59530 25.784 7.82e-15 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g1783 - - gmx:100789342 504.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo02g1783 02 55903761 55906771 Amo16g0292 16 4412798 4415202 PCT