Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0204 ATGTTGAATGAGCAATTTGCTTCCACAAGCCATGCAGCAAGAACAACAACACAACATGGACATGGTGGTGGTGATGATGATCAAGAAGAAGAAGAACACACCATAAGAGAAATTCATGCCTTAACACCACCTAGACCCCCAGCAACAACAAACCATGGGAATAGGAGAAGAGAAGCTTGGGAAACTCATCACAGCCACCGTTCATCTTCTTTGTCCATGGCAAGCACAGATGGTGGTTCAAGTGAGAACTTCACAAGCATGAGTAGGGAGTTCAGTGCTCTTGTTCTTGCAGGTTCAACTATTGATCATAACAACATCAACACTACTAGCAGCTCCATGATCATGAACACTGGCCATGACAACACTGAAATTATTGGAGGAGGAAACAACAATACCAGCAGCAACAACAACAACAATAACTTGTTGGGGAGGATTAGAGAAGAGGACATGATGGAAGAGACTAACCCTTTGGCTATTGTTCCAGATAACCATCCATTGGATCCTCTTCCATCACCAAGAGGAATGACTAGTGGTGGTGCAGGTTCTAGTAGTGGTCATCATCAACATCAACATCATCATCATCAAGTAGTTGAAGAGGTTTCAGTGCAAAGGGTGAAGAAGGAGGAGGTTGATGCAAAGATATCAGCATGGCAGAACAACAAGATTGCAAAGATTAACAACAGATTCAAGAGAGAGGATGCTGTCATCAAAGGCTGGGAGAGTGAGCAGGTTCAGAAGGCTACTTCTTGGATGAAGAAAGTTGAGAGGAAGCTGGAAGAGAAAAGAGCAAGAGCAATGGAGAAAATGCAAAATGAGGTAGCAAAGGCTCATAGGAAAGCAGAGGAGAGAAGGGCATCAGCAGAGGCTAAAAGAGGAACCAAAGTTGCAAGGGTTCTTGAGATTGCTTCCCTCATGAGAGCTGTTGGAAGACCCCCTTCCAAAAAATCCTTCTTCAAAAGTTAA 963 0.4372 MLNEQFASTSHAARTTTQHGHGGGDDDQEEEEHTIREIHALTPPRPPATTNHGNRRREAWETHHSHRSSSLSMASTDGGSSENFTSMSREFSALVLAGSTIDHNNINTTSSSMIMNTGHDNTEIIGGGNNNTSSNNNNNNLLGRIREEDMMEETNPLAIVPDNHPLDPLPSPRGMTSGGAGSSSGHHQHQHHHHQVVEEVSVQRVKKEEVDAKISAWQNNKIAKINNRFKREDAVIKGWESEQVQKATSWMKKVERKLEEKRARAMEKMQNEVAKAHRKAEERRASAEAKRGTKVARVLEIASLMRAVGRPPSKKSFFKS* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0204 320 Coils Coil 251 290 - -
Amo16g0204 320 MobiDBLite consensus disorder prediction 1 84 - -
Amo16g0204 320 PANTHER OS02G0116800 PROTEIN 25 317 - -
Amo16g0204 320 MobiDBLite consensus disorder prediction 51 65 - -
Amo16g0204 320 MobiDBLite consensus disorder prediction 265 292 - -
Amo16g0204 320 Pfam Remorin, C-terminal region 209 314 IPR005516 -
Amo16g0204 320 MobiDBLite consensus disorder prediction 66 84 - -
Amo16g0204 320 MobiDBLite consensus disorder prediction 1 17 - -
Amo16g0204 320 MobiDBLite consensus disorder prediction 20 39 - -
Amo16g0204 320 PANTHER CARBOXY-TERMINAL REGION REMORIN 25 317 - -
Amo16g0204 320 MobiDBLite consensus disorder prediction 160 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0204 Amo-Chr16 2987548 2990387 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0204 - - adu:107492944 503.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0204 16 2987548 2990387 Amo16g0204 16 2987548 2990387 ECH
Amo16g0204 16 2987548 2990387 Amo12g1731 12 83178425 83181969 PCT
Amo12g1731 12 83178425 83181969 Amo16g0204 16 2987548 2990387 PCT