Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g1731 ATGTTGAATGATCAAAGCACATCAACACTATCATCGACAAGAAGAAACCATGGCAGAGAGGAGCAAAATAACAACAATATTAATGATCAAGGAGAAGATGACCAATATATCAGAGAAATTCATGCTTTAACCCCTCCTCTAACCACCACTACGGCCACCATGACCGCTAACCTTCGCCGTAGAATAAGAGAAGCTTGGGAGACACAAAGCCACCAGTCATCATCGTTGTCCACCATGGCTAGCATAGAAGGTGTTGCTGCAGGTTCGAGTGAGAACTTGAGCACCATGAGCAGGGAATTCAGCGCTCTCGTTCTTGCAGGATCGAACAACAGCCCAATGAATGACCCTCCAAATCATGGCGGAACTGAAGGAAGCAGAAACTTGGAGAGGATTCGAGAAGATGATATTGACAATCAATTGAGGACGATGATGATGGAGGAGACGAACCCTCTGGCAATCGTGCCGGATAACAACCCCTTAGACCCGGTGATTGCTTCTTCGCCGACGAGGCATGGTGGCGGTGGCGGCGGAGGAATGATGGTGGGTGGTGTTACGATCAGTGGGCAGAGCGAAGTGTGGGTGCAGAGAGTGAAGAAGGAGGAGATTGAAGCGAAGATTGCCGCGTGGCAGAACGCTAAGGTTGCTAAGATCAACAACAGATTCAAGAGGGAAGATTCTGTGATCAGTGGGTGGGAGAATGAGCAACTTCAGAAAACCACTTCATGGATGAACAAAGTTGAGAGGAAGCTGGAGGAGAAAAGAGCAAAAGCACTTGAAAAAATGCAGAATGAAGTAGCAAAAGCTCATAGGAAAGCAGAGGAGAGAAGGGCATCAGCAGAAGCTAAAAGGGGAACTAAAGTTGCTAGGGTTCTTGAGGTTGCAAGCCTTATGAAAGCACTAGGAAGAACTCCTACCAAAAGATCCTTCTTTTAA 933 0.4705 MLNDQSTSTLSSTRRNHGREEQNNNNINDQGEDDQYIREIHALTPPLTTTTATMTANLRRRIREAWETQSHQSSSLSTMASIEGVAAGSSENLSTMSREFSALVLAGSNNSPMNDPPNHGGTEGSRNLERIREDDIDNQLRTMMMEETNPLAIVPDNNPLDPVIASSPTRHGGGGGGGMMVGGVTISGQSEVWVQRVKKEEIEAKIAAWQNAKVAKINNRFKREDSVISGWENEQLQKTTSWMNKVERKLEEKRAKALEKMQNEVAKAHRKAEERRASAEAKRGTKVARVLEVASLMKALGRTPTKRSFF* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g1731 310 Coils Coil 243 282 - -
Amo12g1731 310 MobiDBLite consensus disorder prediction 107 121 - -
Amo12g1731 310 PANTHER CARBOXY-TERMINAL REGION REMORIN 26 309 - -
Amo12g1731 310 MobiDBLite consensus disorder prediction 1 31 - -
Amo12g1731 310 MobiDBLite consensus disorder prediction 107 131 - -
Amo12g1731 310 Pfam Remorin, C-terminal region 201 306 IPR005516 -
Amo12g1731 310 PANTHER OS02G0116800 PROTEIN 26 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g1731 Amo-Chr12 83178425 83181969 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g1731 - - ahf:112745528 387.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g1731 12 83178425 83181969 Amo12g1731 12 83178425 83181969 ECH
Amo16g0204 16 2987548 2990387 Amo12g1731 12 83178425 83181969 PCT
Amo12g1731 12 83178425 83181969 Amo16g0204 16 2987548 2990387 PCT