Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0081 ATGGCATCGAAGCAAGGTGTGAAACCGAGGAGATTCGGAGGAGCGAGCAGCACCTCCAAGGGCGCCGCCAATTCGCCTACGTCTTCCACCACGTCGTCGTCTAAGCAGTTTCTAGAAACTTCCGTTGACGGACAGAGCTCCCCTGCTTCTTCCTCCGCTCGAAGCAAGCCGCACGCGTTCTATCCGGAACCTGTGCCGTTGGAGGTACACAGGGCCAAAGAGAATGTCACCGTCACCGTCCGATTTCGTCCTCTTAATCCGAGGGAGATTCGTCAGGGAGAAGAGATTGCTTGGTATGCTGACGGAGAAACCATAGTGCGAAACGAGTATAATCCCTCCATAGCGTATGCATACGATCGTGTCTTTGGTCCCACGACCACAACTCGTCATGTTTATGATGTTGCTTCTCAGCATGTTGTTAGTGGTGCTATGGAGGGCATCAACGGTACAATATTTGCATATGGGGTAACAAGCAGTGGGAAGACTCATACAATGCATGGTGATCAAAGATCTCCTGGAATCATACCTCTTGCCGTGAAGGATGCTTTTAGCATTATCCAAGAGACTCCAAATCGGGAGTTCCTCCTTCGTGTTTCATACTTGGAGATATACAATGAGGTTGTTAATGACTTACTAAATCCAGCAGGACAGAACTTAAGAATCAGAGAGGATGCGCAGGGAACCTTCGTTGAGGGAATAAAGGAAGAGGTTGTACTCTCCCCTGCTCATGCACTGTCCCTGATAGCTGCTGGAGAAGAGCACAGACATGTGGGATCCACAAACTTCAACCTACTCAGCAGCAGGAGCCATACAATATTTACCCTGACCATAGAGAGTAGTCCATGTGGTGAAAATAGTGAAGGAGAAGCAGTGACACTGTCACAACTGAATCTCATCGATCTGGCAGGTTCTGAGAGCTCAAAAGCTGAAACAACTGGCATGAGAAGAAGAGAAGGATCTTATATCAATAAAAGTCTTCTAACTCTTGGAACTGTCATTTCAAAATTAACCGAAGATAAACCCAGTCACATACCTTATAGGGACTCCAAACTGACTAGACTACTTCAGTCTTCACTCAGTGGTCATGGACGTGTATCTCTTATCTGCACAGTGACTCCTTCCTCAAGTAGTACTGAGGAGACACATAATACATTGAAGTTTGCTCACCGGGCAAAGCATATTGAAATCCAAGCAGCACAAAACAAAATAATTGATGAGAAGTCACTTATCAAGAAATACCAACAAGAGATTCAATGCCTAAAGGAAGAATTGGAACAACTAAAGAGGGGTATTGTTACAGTTCAACCAAAAGATACTGGGGAAGATGACATTGTGCTTCTAAAACAAAAGTTAGAGGATGGTCAAGTTAAGTTGCAATCCCGATTGGAACAAGAAGAAGAAGCTAAAGCTGCTTTGTTAGGAAGAATTCAACGGTTGACTAAACTGATTTTGGTCTCCACAAAAGCATCACATTCAACCAGATTTCCTAACAGGCCTGGTCCTCGTAGAAGACATTCCTTCGGAGAAGAGGAGCTGGCATACCTTCCATACAAGAGGCGGGATTTAATCTTGGATGAGGAAAATATTGATTTGTATGTTAATCTGGAGGGAAATGTTGAATCARCTGTTGATTCTTTGAAGGAGGAAAAAAAGACAAAAAAACATGKACTACTAAACTGGTTGAAGTTACGTAAACGAGATGGTGGCTTGACAGGCACTAGTGRTAAATCCAGTGGTGCAAAATCTACTAGCACACCTTCAACACCTCAAGGAGAAAGTGGTAACCATGCAGAATCCCGGCTTTCTCATTCTCTAGCTGCAGAAAGTTCTCCATCKGCTGATCTTATATCAGAGGCAAGAGAGGATAAAGATACTCGCGAGGATAGTTTATTGGGACCAGAAACACCTTTGACAAGCATCAAGTCAGTTGATCAGATCGATCTTCTAAGGGAGCAGCACAAGATTTTATGTGGAGAAGTTGCCCTTCATTCAAGTGCTTTGAAGAGGCTGTCTGAGGAAACAGCACGAAATCCTCAGGATGGTCAGATTCATGTGGAGATGAAAAAGTTGAAAGATGAAATTAAGGCAAAGAGTGAACAAATAGATTTGCTGGAAAAGCAAATTTCTAATTCTGTCATTGTTTCAGATAAGATGGATCAATCAGGAATGTCACAGAAGACTGTTTCTGAGTTGATGGCACAGCTAAATGAGAAATCTTTCGAACTTGAGGTCAAAGTAGCAGATAATCATATAATTCAAGAACAGCTTAGTCAGAAGATTGGTGAATGTGAAAATCTGCGAGAAACGATTGCTTCTCTGAAACAGCAACTTGAAGATGCACTGGAGTTGAGAAATTTTAGCCCTGCAGCAAATCATTCTCAACATGGTGAACTTCATCTTGACAAGGGAAATGAGTTGATAAATGATACAAATGAAGGGCTGCTTTTACAAGCACAGATAGAAGAGCTGAAGCAGAAGGTGAAAGAACTAACAGATGCAAAAGACCAGCTAGAACTTCGAAATCAGAAACTGGCAGAAGAGAGTTCATATGCTAAAGGACTAGCTTCAGCTGCTGCTGTTGAGCTCAAGGCATTGTCAGAAGAAGTTGCCAAACTCATGAATCATAATGAAAGACTAGCTGCKGAGCTAGCTGCATCCAAGAATTCATCTTCGCAGCGCAGAACCAGTGGAACTGTACAAAATGGACGAAGGGAAAGTCATGGTAGACTCAGACGAAATGATCAGGGTGGGTCAAATGCAGATGTCAAGAGAGAATTAGCCTTGAGTAAAGAAAGGGAACTTTCATATGAAGCTGCTCTTTTAGAGAGAGATCAGAAGGAGGCCGAGCTTCAAAGAAAGGTTGAGGAATCTAAGCAAAGAGAAGCGTATCTTGAAAACGAGCTTGCTAACATGTGGGTTCTTGTGGCAAAGTTAAAAAAGTCGCAAGGAGCTGACAATGATGCTTCTGCGTCAACCAGAGAGTTTCAATTTAATGAGTTTGACATTTGA 3009 0.4297 MASKQGVKPRRFGGASSTSKGAANSPTSSTTSSSKQFLETSVDGQSSPASSSARSKPHAFYPEPVPLEVHRAKENVTVTVRFRPLNPREIRQGEEIAWYADGETIVRNEYNPSIAYAYDRVFGPTTTTRHVYDVASQHVVSGAMEGINGTIFAYGVTSSGKTHTMHGDQRSPGIIPLAVKDAFSIIQETPNREFLLRVSYLEIYNEVVNDLLNPAGQNLRIREDAQGTFVEGIKEEVVLSPAHALSLIAAGEEHRHVGSTNFNLLSSRSHTIFTLTIESSPCGENSEGEAVTLSQLNLIDLAGSESSKAETTGMRRREGSYINKSLLTLGTVISKLTEDKPSHIPYRDSKLTRLLQSSLSGHGRVSLICTVTPSSSSTEETHNTLKFAHRAKHIEIQAAQNKIIDEKSLIKKYQQEIQCLKEELEQLKRGIVTVQPKDTGEDDIVLLKQKLEDGQVKLQSRLEQEEEAKAALLGRIQRLTKLILVSTKASHSTRFPNRPGPRRRHSFGEEELAYLPYKRRDLILDEENIDLYVNLEGNVESXVDSLKEEKKTKKHXLLNWLKLRKRDGGLTGTSXKSSGAKSTSTPSTPQGESGNHAESRLSHSLAAESSPSADLISEAREDKDTREDSLLGPETPLTSIKSVDQIDLLREQHKILCGEVALHSSALKRLSEETARNPQDGQIHVEMKKLKDEIKAKSEQIDLLEKQISNSVIVSDKMDQSGMSQKTVSELMAQLNEKSFELEVKVADNHIIQEQLSQKIGECENLRETIASLKQQLEDALELRNFSPAANHSQHGELHLDKGNELINDTNEGLLLQAQIEELKQKVKELTDAKDQLELRNQKLAEESSYAKGLASAAAVELKALSEEVAKLMNHNERLAAELAASKNSSSQRRTSGTVQNGRRESHGRLRRNDQGGSNADVKRELALSKERELSYEAALLERDQKEAELQRKVEESKQREAYLENELANMWVLVAKLKKSQGADNDASASTREFQFNEFDI* 1003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0081 1002 MobiDBLite consensus disorder prediction 883 903 - -
Amo16g0081 1002 Coils Coil 936 967 - -
Amo16g0081 1002 MobiDBLite consensus disorder prediction 17 54 - -
Amo16g0081 1002 MobiDBLite consensus disorder prediction 571 611 - -
Amo16g0081 1002 MobiDBLite consensus disorder prediction 880 926 - -
Amo16g0081 1002 Coils Coil 448 482 - -
Amo16g0081 1002 Pfam Kinesin motor domain 81 394 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo16g0081 1002 Coils Coil 687 707 - -
Amo16g0081 1002 Coils Coil 813 847 - -
Amo16g0081 1002 PANTHER KINESIN-LIKE PROTEIN KIN-7K, CHLOROPLASTIC ISOFORM X1 50 995 - -
Amo16g0081 1002 MobiDBLite consensus disorder prediction 1 61 - -
Amo16g0081 1002 ProSitePatterns Kinesin motor domain signature. 294 305 IPR019821 GO:0003777|GO:0005524|GO:0007018
Amo16g0081 1002 Coils Coil 756 783 - -
Amo16g0081 1002 MobiDBLite consensus disorder prediction 568 636 - -
Amo16g0081 1002 PRINTS Kinesin heavy chain signature 295 313 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo16g0081 1002 PRINTS Kinesin heavy chain signature 344 365 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo16g0081 1002 PRINTS Kinesin heavy chain signature 146 167 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo16g0081 1002 PRINTS Kinesin heavy chain signature 260 277 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo16g0081 1002 Coils Coil 862 889 - -
Amo16g0081 1002 ProSiteProfiles Kinesin motor domain profile. 75 394 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo16g0081 1002 Coils Coil 396 430 - -
Amo16g0081 1002 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 75 429 IPR027417 -
Amo16g0081 1002 Gene3D Kinesin motor domain 67 425 IPR036961 -
Amo16g0081 1002 MobiDBLite consensus disorder prediction 615 630 - -
Amo16g0081 1002 MobiDBLite consensus disorder prediction 904 926 - -
Amo16g0081 1002 CDD KISc_CENP_E 75 394 - -
Amo16g0081 1002 PANTHER CENTROMERE PROTEIN E 50 995 - -
Amo16g0081 1002 SMART kinesin_4 73 402 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0081 Amo-Chr16 1085509 1098624 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0081 1 725 Miscellaneous Gene Families AT5G06670 70.492 0.0 930
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0081 K11498 - gmx:100815027 1606.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0081 16 1085509 1098624 Amo16g0081 16 1085509 1098624 ECH
Amo16g0081 16 1085509 1098624 Amo06g0425 06 6005288 6017373 hybridization