Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0425 ATGGCATCGAAGCAAGGTGTGAAACCGAGGAGATTCGGAGGAGCGAGCAGCACCTCCAAGGGCGCCGCCAATTCGCCTACGTCTTCCACCACGTCGTCGTCTAAGCAGTTTCTAGAAACTTCCGTTGACGGACAGAGCTCCCCTGCTTCTTCCTCCGCTCGAAGCAAGCCGCACGCGTTCTATCCGGAACCTGTGCCGTTGGATGTACACAGGGCCAAAGAGAATGTCACCGTCACCGGAGAAGAGATTGCTTGGTATGCTGACGGAGAAACCATAGTGCGAAACGAGTATAATCCCTCCATAGCGTATGCATACGATCGTGTCTTTGGTCCCACGACCACAACTCGTCATGTTTATGATGTTGCTTCTCAGCATGTTGTTAGTGGTGCTATGGAGGGCATCAACGGTACAATATTTGCATATGGGGTAACAAGCAGTGGGAAGACTCATACAATGCATGGTGATCAAAGATCTCCTGGAATCATACCTCTTGCCGTGAAGGATGCTTTTAGCATTATCCAAGAGACTCCAAATCGGGAGTTCCTCCTTCGTGTTTCATACTTGGAGATATACAATGAGGTGACTTCTTCTTCTTCTACTACTACTACTTTCTTACATGTGGGATCCACAAACTTCAACCTACTCAGCAGCAGGAGCCATACAATATTTACCCTGACCATAGAGAGTAGTCCATGTGGTGAAAATAGTGAAGGAGAAGCAGTGACACTGTCACAACTGAATCTCATCGATCTGGCAGGTTCTGAGAGCTCAAAAGCTGAAACAACTGGCATGAGAAGAAGAGAAGGATCTTATATCAATAAAAGTCTTCTAACTCTTGGAACTGTCATTTCAAAATTAACCGAAGATAAACCCAGTCACATACCTTATAGGGACTCCAAACTGACTAGACTACTTCAGTCTTCACTCAGTGGTCATGGACGTCTTATCTGCACAGTGACTCCTTCCTCAAGTAGTACTGAGGAGACACATAATACATTGAAGTTTGCTCACCGGGCAAAGCATATTGAAATCCAAGCAGCACAAAACAAAATAATTGATGAGAAGTCACTTATCAAGAAATACCAACAAGAGATTCAATGCCTAAAGGAAGAATTGGAACAACTAAAGAGGGGTATTGTTACAGTTCAACCAAAAGATACTGGGGAAGATGACATTGTGCTTCTAAAACAAAAGTTAGAGGATGGTCAAGTTAAGTTGCAATCCCGATTGGAACAAGAAGAAGAAGCTAAAGCTGCTTTGTTAGGAAGAATTCAACGGCTGACTAAACTGATTTTGGTCTCCACAAAAGCATCACATTCAACCAGATTTCCTAACAGGCCTGGTCCTCGTAGAAGACATTCCTTCGGAGAAGAGGAGCTGGCATACCTTCCATACAAGAGGCGGGATTTAATCTTGGATGAGGAAAATATTGATTTGTATGTTAATCTGGAGGGAAATGTTGAATCAACTGTTGATTCTTTGAAGGAGGAAAAAAAGACAAAAAAACATGGACTACTAAACTGGTTGAAGTTACGTAAACGAGACGGTGGCTTGACAGGCACTAGTGATAAATCCAGTGGTGCAAAATCTACCAGCACACCTTCAACACCTCAAGGAGAAAGTGGTAACCATGCAGAATCCCGGCTTTCTCATTCTCTAGCTGCAGAAAGTTCTCCATCTGCTGATCTTATATCAGAGGCAAGAGAGGATAAAGATACTCACGAGGATAGTTTATTGGGACCAGAAACACCTTTGACAAGCATCAAGTCAGTTGATCAGATCGATCTTCTAAGGGAGCAGCACAAGATTTTATGTGGAGAAGTTGCCCTTCATTCAAGTGCTTTGAAGAGGCTGTCTGAGGAAACAGCACGAAATCCTCAGGATGGTCAGATTCATGTGGAGATGAAAAAGTTGAAAGATGAAATCAAGGCAAAGAGTGAACAAATAGATTTGCTGGAAAAGCAAATTTCTAATTCTGTCGTTGTTTCAGATAAGATGGATCAATCAGGAATATCACAGGTCAAAGTAGCAGATAATCATATAATTCAAGAACAGCTTAATCAGAAGGTGATTGGTGAATGTGAAAATCTGCGAGAAACGATTGCCTCTCTGAAACAGCAACTTGAAGATGCACCGGAGTTGAGAAATTTCAGCGCTGCAGCAAATCATTCTCAACATTGTGAACTTCATCTTGACCAGGGAAATGAGTTGATAAATGATACAAATGAAGGGCTGCTTTTACAAGCACAGAAGGTGAAAGAACTAACAGATGCAAAAGACCAGCTAGAACTTCGAAATCAGAAACTGGCAGAAGAGAGTTCATATGCTAAAGGACTAGCTTCAGCTGCTGCTGTTGAGCTCAAGGCATTGTCAGAAGAAGTTGCCAAACTCATGAATCATAATGAAAGACTAGCTGCTGAGCTAGCTGCATCCAAGAATTCATCTTCGCAGCGCAGAACCAGTGGAACTGTACAAAATGGACGAAGGGAAAGTCATGGTAGACTCAGACGAAATGATCAGGGTGGATCAAATGCAGATGTCAAGAGAGAATTAGCCTTGAGTAAAGAAAGGGAACTTTCATATGAAGCTGCTCTTTTAGAGAGAGATCAGAAGGAGGCCGAGCTTCAAAGAAAGGTTGAGGAATCTAAGCAAAGAGAAGCGTATCTTGAAAATGAGCTTGCTAACATGTGGGTTCTTGTGGCAAAGCTAAAAAAGTCGCAAGGAGCTGACAATGATGCTTCTGCGTCAACCAGAGAGTTTCAATTTAATGAGTTTGACATTTGA 2784 0.4274 MASKQGVKPRRFGGASSTSKGAANSPTSSTTSSSKQFLETSVDGQSSPASSSARSKPHAFYPEPVPLDVHRAKENVTVTGEEIAWYADGETIVRNEYNPSIAYAYDRVFGPTTTTRHVYDVASQHVVSGAMEGINGTIFAYGVTSSGKTHTMHGDQRSPGIIPLAVKDAFSIIQETPNREFLLRVSYLEIYNEVTSSSSTTTTFLHVGSTNFNLLSSRSHTIFTLTIESSPCGENSEGEAVTLSQLNLIDLAGSESSKAETTGMRRREGSYINKSLLTLGTVISKLTEDKPSHIPYRDSKLTRLLQSSLSGHGRLICTVTPSSSSTEETHNTLKFAHRAKHIEIQAAQNKIIDEKSLIKKYQQEIQCLKEELEQLKRGIVTVQPKDTGEDDIVLLKQKLEDGQVKLQSRLEQEEEAKAALLGRIQRLTKLILVSTKASHSTRFPNRPGPRRRHSFGEEELAYLPYKRRDLILDEENIDLYVNLEGNVESTVDSLKEEKKTKKHGLLNWLKLRKRDGGLTGTSDKSSGAKSTSTPSTPQGESGNHAESRLSHSLAAESSPSADLISEAREDKDTHEDSLLGPETPLTSIKSVDQIDLLREQHKILCGEVALHSSALKRLSEETARNPQDGQIHVEMKKLKDEIKAKSEQIDLLEKQISNSVVVSDKMDQSGISQVKVADNHIIQEQLNQKVIGECENLRETIASLKQQLEDAPELRNFSAAANHSQHCELHLDQGNELINDTNEGLLLQAQKVKELTDAKDQLELRNQKLAEESSYAKGLASAAAVELKALSEEVAKLMNHNERLAAELAASKNSSSQRRTSGTVQNGRRESHGRLRRNDQGGSNADVKRELALSKERELSYEAALLERDQKEAELQRKVEESKQREAYLENELANMWVLVAKLKKSQGADNDASASTREFQFNEFDI* 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0425 927 Coils Coil 344 378 - -
Amo06g0425 927 MobiDBLite consensus disorder prediction 17 54 - -
Amo06g0425 927 SMART kinesin_4 73 350 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo06g0425 927 Coils Coil 787 814 - -
Amo06g0425 927 Coils Coil 861 892 - -
Amo06g0425 927 MobiDBLite consensus disorder prediction 563 578 - -
Amo06g0425 927 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 86 377 IPR027417 -
Amo06g0425 927 Pfam Kinesin motor domain 206 342 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo06g0425 927 Pfam Kinesin motor domain 87 194 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo06g0425 927 Gene3D Kinesin motor domain 202 373 IPR036961 -
Amo06g0425 927 PANTHER CENTROMERE PROTEIN E 60 195 - -
Amo06g0425 927 MobiDBLite consensus disorder prediction 808 828 - -
Amo06g0425 927 ProSiteProfiles Kinesin motor domain profile. 75 342 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo06g0425 927 MobiDBLite consensus disorder prediction 1 66 - -
Amo06g0425 927 MobiDBLite consensus disorder prediction 520 559 - -
Amo06g0425 927 PRINTS Kinesin heavy chain signature 210 227 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo06g0425 927 PRINTS Kinesin heavy chain signature 294 315 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo06g0425 927 PRINTS Kinesin heavy chain signature 245 263 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo06g0425 927 PRINTS Kinesin heavy chain signature 133 154 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo06g0425 927 PANTHER KINESIN-LIKE PROTEIN KIN-7K, CHLOROPLASTIC ISOFORM X1 206 920 - -
Amo06g0425 927 Coils Coil 752 772 - -
Amo06g0425 927 Coils Coil 687 714 - -
Amo06g0425 927 MobiDBLite consensus disorder prediction 808 847 - -
Amo06g0425 927 Coils Coil 396 430 - -
Amo06g0425 927 ProSitePatterns Kinesin motor domain signature. 244 255 IPR019821 GO:0003777|GO:0005524|GO:0007018
Amo06g0425 927 MobiDBLite consensus disorder prediction 829 847 - -
Amo06g0425 927 Coils Coil 635 655 - -
Amo06g0425 927 MobiDBLite consensus disorder prediction 516 584 - -
Amo06g0425 927 PANTHER KINESIN-LIKE PROTEIN KIN-7K, CHLOROPLASTIC ISOFORM X1 60 195 - -
Amo06g0425 927 PANTHER CENTROMERE PROTEIN E 206 920 - -
Amo06g0425 927 Gene3D Kinesin motor domain 66 201 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0425 Amo-Chr6 6005288 6017373 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g0425 1 674 Miscellaneous Gene Families AT5G06670 63.165 0.0 783
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0425 K11498 - gmx:100815027 1415.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0081 16 1085509 1098624 Amo06g0425 06 6005288 6017373 hybridization