Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0072 ATGCGCATCATTGCCGAGCCCGAGGGAAGGGCAAAAGACACCCTTCCCTTCGGGACTACGGTAATTATAGAAGACCCACTAACCGCTGGGCCGGAACCGGAGTCAAAGCTGATAGGAAAGGCCCAAGGGCTATATACGTCAATTTCGCAAGTGGAAATGGCCCTAATGATGGTGATGACGTTTGCATTCACGGAAGGAGAATTCAACGGAAGCACACTCAGCGTTTTGGGGCGTAACAACGTTGAGCTACCCGTTAGAGAGATGCCAATCGTTGGTGGAACTGGTGTGTTCCAATTCGCACGTGGGATTGCTAGGACCAATTTCGTTACGGTTGATTTCTCAAAAGGTGATGCTATTGTGGAATACAATGTTTATGTGTACCACTACTTAACCCCTCTTCTTGATTCAAATCCTGCTCATTTTAAAGAGGGCCTTGAATATATGAAGCTCAGCCACCTGCACTTCTATTTCCACGACACTGTTAGCGGCCCAAGGCCCACTGCCGTCAGGGTGGCCCAGGCTCATATGACAGACAAATTCCCAACACTATTCGGAGCCGTGACGATGGCGGATGACCCATTGACCATTGGGCCTGAACCGGGATCCAAGCTTATTGGAAAGGCCCAAGGAATTTATGCTTCAGCTTCTCAGAATGATGTGGGGTTAATGATGGTGATGAACTTGGAATTTTCGGAAGGGAAGTATAATGGAAGCACGTTGAGCTTGCTGGGGCGCAACGCAGTGTTTTTCGCCGTTAGGGAGATGCCGATCGTCGGTGGAAGCGGGGTTTTCCGGTTTGGTCGCGGATATGCTGTGGCCAAAACTCACTTGTTTAATACCACCACTCTAGATGCTATTGTAGAATACAATGTTTATGTATTTCACTATTAA 891 0.4826 MRIIAEPEGRAKDTLPFGTTVIIEDPLTAGPEPESKLIGKAQGLYTSISQVEMALMMVMTFAFTEGEFNGSTLSVLGRNNVELPVREMPIVGGTGVFQFARGIARTNFVTVDFSKGDAIVEYNVYVYHYLTPLLDSNPAHFKEGLEYMKLSHLHFYFHDTVSGPRPTAVRVAQAHMTDKFPTLFGAVTMADDPLTIGPEPGSKLIGKAQGIYASASQNDVGLMMVMNLEFSEGKYNGSTLSLLGRNAVFFAVREMPIVGGSGVFRFGRGYAVAKTHLFNTTTLDAIVEYNVYVFHY* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0072 296 PANTHER NUCLEOPORIN-RELATED 2 128 IPR004265 -
Amo16g0072 296 Pfam Dirigent-like protein 151 294 IPR004265 -
Amo16g0072 296 Pfam Dirigent-like protein 4 126 IPR004265 -
Amo16g0072 296 Gene3D - 2 126 IPR044859 -
Amo16g0072 296 Gene3D - 139 292 IPR044859 -
Amo16g0072 296 PANTHER DIRIGENT PROTEIN 17-RELATED 2 128 - -
Amo16g0072 296 PANTHER NUCLEOPORIN-RELATED 146 295 IPR004265 -
Amo16g0072 296 PANTHER DIRIGENT PROTEIN 17-RELATED 146 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0072 Amo-Chr16 926608 932441 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0072 - - gmx:100816095 233.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0072 16 926608 932441 Amo16g0072 16 926608 932441 ECH
Amo16g0072 16 926608 932441 Amo06g0433 06 6186478 6197725 hybridization