Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0433 ATGCCCATATCCAAAACCGTCTTCATTTCTGCCACCCTCTTCTCCTCCCTCGTTGCCGCCGCCGCCTACTACCAAAATATCTCCCCCACGTCCCTAGGTTTCGTGGAGGAGAAACTAACTCACATCCGATTCTACTTCCATGATGTTGTTACGGGCCCAAATGCTACCATAATCATTTCCATAAGTCCACTTATGGGAAAATCCAAGGCCCCACTTCCATTCGGGTCCTTGGTAATGCTGGAAGACCCGTTAACTGTGGGGCCCGAACCCGATTCCAAACTCATTGGAAAGGCGCAAGGATTCTACACAATGGTGACACAACGCGAGGACATTGATTTAGAGCTTGTGATGGGTATGACCATAACATTCACCGAAGGGAAGTTCAACGGCAGCACCCTCAGCCTCTTTGGCCGGAATTACATCTTTGACCCCGTTAGAGAGATGCCGATCGTTGGTGGAACCGGCGCGTTCCGATTCGCGCGTGGGTTTGTTCGTGCTAAGACTTACTCAGTGGATTATTACAAAGGTGATGCTGTTGTGGAATACAACGTGTACGTCTTCCACTATTCAAACCAAGGCTTTGATGCTTCTACTCCTCAAGAGCACTTCAAACTCTCCACCATGCCCAACTCCAAAATTTTCTTCTTCCTTCCCTTTTTCTTTTCCTTCATTGCCGCGGAATCCGTCGGCTTCGCCCGGAGGATCTCCCCAAGATCTTTGGGCTTTCATGAGGAGAAACTCACCCACCTCCACTTCTTTTTCCACGACGTCGTTAGTGGGCCAAAGCCCACTATGCGCATCATTGCCGAGCCCGAGGGAAGGGCAAAAGACACATTTCCCTTCGGGACTACGGTAATTATAGAAGACCCACTAACCGCTGGGCCGGAACCGGAGTCAAAGCTGATAGGAAAGGCCCAAGGGCTATACACGTCAATTTCGCAAGTGGAAATGGCCCTAATGATGGTGATGACGTTTGCATTCACGGAAGGAGAATTCAATGGAAGCACACTCAGCGTTTTGGGGCGTAACAACGTTGAGCTACCCGTTAGAGAGATGCCAATCGTTGGTGGAACTGGTGTGTTCCAATTCGCACGTGGGATTGCTAGGACCAATTTCGTTACGGTTGATTTCTCAAAAGGTGATGCTATTGTGGAATACAATGTTTATGTGTACCACTACTTAACCCCTCTTCTTCATTCATCATCTTCAAATCCTGATCATTTTAAAGAGGGCCTTGAATATATGCACCCTCCTTTCCACCGAAGCATCTCTCCTAAATCTTTGCACCTCGACCGGCAGAAGCTCAGCCACCTACACTTCTATTTCCACGACACTGTTAGCGGCCCAAGGCCCACTGCCGTCAGGGTGGCCCAGGCTCAAATGACAGACAAATTCCCCACACAATTCGGAGCCGTGGCGATGGCGGATGACCCATTGACCATTGGGCCTGAACCGGAATCCAAGCTTATTGGAAGGGCCCAAGGAATTTATGCTTCAGCTTCTCAGAATGATGTGGGGTTAATGATGGTGATGAACTTCGAATTTTCGGAAGGGAAGTATAATGGAAGCACGTTGAGCTTGCTGGGGCGCAACGCAGTGTTTTCCGCCGTTAGGGAGATGCCGATCGTCGGGGGAAGCGGGATTTTCCGGTTTGGTCGGGGATATGCTGTGGCCAAAACTCACTTGTTTAATACCACCACTCTAGATGCTATTGTAGAATACAATGTTTATGTATTTCACTATTAA 1746 0.4903 MPISKTVFISATLFSSLVAAAAYYQNISPTSLGFVEEKLTHIRFYFHDVVTGPNATIIISISPLMGKSKAPLPFGSLVMLEDPLTVGPEPDSKLIGKAQGFYTMVTQREDIDLELVMGMTITFTEGKFNGSTLSLFGRNYIFDPVREMPIVGGTGAFRFARGFVRAKTYSVDYYKGDAVVEYNVYVFHYSNQGFDASTPQEHFKLSTMPNSKIFFFLPFFFSFIAAESVGFARRISPRSLGFHEEKLTHLHFFFHDVVSGPKPTMRIIAEPEGRAKDTFPFGTTVIIEDPLTAGPEPESKLIGKAQGLYTSISQVEMALMMVMTFAFTEGEFNGSTLSVLGRNNVELPVREMPIVGGTGVFQFARGIARTNFVTVDFSKGDAIVEYNVYVYHYLTPLLHSSSSNPDHFKEGLEYMHPPFHRSISPKSLHLDRQKLSHLHFYFHDTVSGPRPTAVRVAQAQMTDKFPTQFGAVAMADDPLTIGPEPESKLIGRAQGIYASASQNDVGLMMVMNFEFSEGKYNGSTLSLLGRNAVFSAVREMPIVGGSGIFRFGRGYAVAKTHLFNTTTLDAIVEYNVYVFHY* 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0433 581 PANTHER NUCLEOPORIN-RELATED 418 580 IPR004265 -
Amo06g0433 581 Gene3D - 423 577 IPR044859 -
Amo06g0433 581 Gene3D - 33 183 IPR044859 -
Amo06g0433 581 Gene3D - 238 394 IPR044859 -
Amo06g0433 581 PANTHER NUCLEOPORIN-RELATED 213 401 IPR004265 -
Amo06g0433 581 PANTHER NUCLEOPORIN-RELATED 11 197 IPR004265 -
Amo06g0433 581 PANTHER DIRIGENT PROTEIN 11 197 - -
Amo06g0433 581 Pfam Dirigent-like protein 436 579 IPR004265 -
Amo06g0433 581 Pfam Dirigent-like protein 248 390 IPR004265 -
Amo06g0433 581 Pfam Dirigent-like protein 40 187 IPR004265 -
Amo06g0433 581 PANTHER DIRIGENT PROTEIN 213 401 - -
Amo06g0433 581 PANTHER DIRIGENT PROTEIN 418 580 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0433 Amo-Chr6 6186478 6197725 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0433 - - gmx:100816095 251.906
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0072 16 926608 932441 Amo06g0433 06 6186478 6197725 hybridization