Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0037 ATGAATTTCTTTAAATCCATTCTCTCCGACGATCCAGATCCCCCTGGATCCGAATCTGAATCCGACAATGCGCCTCACCCGCAAAACGCAACCGATCCTGATCCCTTCTCATCCGACGCCGCCACGGCCACCGCCGACCACAGTGACGGCGTCGATGGCAGCGGGTGGATTCGGTTCGGTGGCCTGATCAAAACCCTAACCTCCAAATCCGAATCGATAATCGAGACGTACCGCCGGGACCTCCAAGAATTCGGCACGGGACTCAAGAAGGAGATCGAGGTCGCCCATGGCTCCCTCGAGACGGTGGGCCAGGCCATCGATCAGTTGGGATCTACTGTTGTCAAAGGAACGGCCCAGATCATCTCCCAAGGTAAGGAAGCAATCCTAGCCGCCGATCTCGATTCCGATAACAATAGCAACAAAAGCACTAAAAGCCCTAGCAAAGATGGTAGTAGCTCGAATTTGAAAGGGTATAGTAGGTTTGAAGCTCAGATTCGTGCTATTCAGGGTGATGCTAGCACTTACACTGATGAGCCTGAGGATTTGGAAGAGTATGGAAAATGGAAATCAGGGTTTTCGTTGGAAGGGAAGGATAAGGAATTGGAGGGTTTGCTTATTGAGAATGAGGCTATGGAGAGTATTTACAAGAGGCTTGTTCCGAATAGCGTGGATAACGAGAGTTTCTGGTTAAGGTATTTCTATAAGGTGTATAAGCTGAAGAAAGCTGAGGATGTGAGGGCTAGACTTGTGACGACAATGTCAAGGGAAGAGGAGGATTTGAGTTGGGATGTAACAGATGTTGAAGATAATGATGATGATGATGATGATGAGGAGGAGGAGGAGGAGGAGGGAGAAGAGAATGTGGGTCATGGTAAATCAAAGGGTGTGATTGATAAGGAGGTTAGTAGTGAAACTTTGGCAATTGAGGGGAATTCTGACTTGCAAGGTGGTAACTTTGGTGAAAAGGGTGTGGTCGAAACAAAGAAATTGAGTGTGGAAGTGGGGGGAAATTCTTCTCAGGAGGAGTCCAAGGTGGAAAAGGGAAATAGTTCATTGCAAAGTGAAAGTAAGGAACATGGCAATGATTCTGTTGGGGAAACTAAAGTTGAGAGTTCAGTGATTGCTCAAAAGGCGGATGATGGAAGCAACTCATGCAAGGAAGTCGTGAAGGAAGTGGTTGAATCTGGGAAGAATAGTGATTATGCAGCTGGTTCTGATGAGAAAGTGATAGTGGAAACAAAAGTTGATGATGGAAAAACTTCGGTGGTTGAGGCAAGTAAGAGCCCGGCACACGAGGAAGAGGAGGATCTCGGTTGGGATGAGATTGAGGATCTCAGTAGTATTGATGAAAAGAAGACAAGTCCGCCTCGGAGTGGAAGCCCAAGCAAAGTTGATGTGCGGAAGCGGCTGAGTGTTGCAGAGGAAGAAGAAGACTTGAGTTGGGACATTGAAGATGATGATGATGATGCTGTTAAGTCTTGA 1482 0.4723 MNFFKSILSDDPDPPGSESESDNAPHPQNATDPDPFSSDAATATADHSDGVDGSGWIRFGGLIKTLTSKSESIIETYRRDLQEFGTGLKKEIEVAHGSLETVGQAIDQLGSTVVKGTAQIISQGKEAILAADLDSDNNSNKSTKSPSKDGSSSNLKGYSRFEAQIRAIQGDASTYTDEPEDLEEYGKWKSGFSLEGKDKELEGLLIENEAMESIYKRLVPNSVDNESFWLRYFYKVYKLKKAEDVRARLVTTMSREEEDLSWDVTDVEDNDDDDDDEEEEEEEGEENVGHGKSKGVIDKEVSSETLAIEGNSDLQGGNFGEKGVVETKKLSVEVGGNSSQEESKVEKGNSSLQSESKEHGNDSVGETKVESSVIAQKADDGSNSCKEVVKEVVESGKNSDYAAGSDEKVIVETKVDDGKTSVVEASKSPAHEEEEDLGWDEIEDLSSIDEKKTSPPRSGSPSKVDVRKRLSVAEEEEDLSWDIEDDDDDAVKS* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0037 493 Pfam BSD domain 188 244 IPR005607 -
Amo16g0037 493 Coils Coil 239 259 - -
Amo16g0037 493 MobiDBLite consensus disorder prediction 133 155 - -
Amo16g0037 493 MobiDBLite consensus disorder prediction 462 476 - -
Amo16g0037 493 MobiDBLite consensus disorder prediction 407 434 - -
Amo16g0037 493 ProSiteProfiles BSD domain profile. 188 240 IPR005607 -
Amo16g0037 493 MobiDBLite consensus disorder prediction 21 44 - -
Amo16g0037 493 PANTHER SYNAPSE-ASSOCIATED PROTEIN 94 487 - -
Amo16g0037 493 MobiDBLite consensus disorder prediction 260 493 - -
Amo16g0037 493 Gene3D BSD domain 149 250 IPR035925 -
Amo16g0037 493 PANTHER PROTEIN, PUTATIVE-RELATED 94 487 - -
Amo16g0037 493 SUPERFAMILY BSD domain-like 157 245 IPR035925 -
Amo16g0037 493 MobiDBLite consensus disorder prediction 261 285 - -
Amo16g0037 493 SMART wurzfinal6 188 240 IPR005607 -
Amo16g0037 493 MobiDBLite consensus disorder prediction 1 54 - -
Amo16g0037 493 PANTHER SYNAPSE-ASSOCIATED PROTEIN 1 94 - -
Amo16g0037 493 PANTHER PROTEIN, PUTATIVE-RELATED 1 94 - -
Amo16g0037 493 MobiDBLite consensus disorder prediction 132 155 - -
Amo16g0037 493 MobiDBLite consensus disorder prediction 332 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0037 Amo-Chr16 701119 703041 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0037 - - aip:107645366 766.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0037 16 701119 703041 Amo16g0037 16 701119 703041 ECH
Amo16g0037 16 701119 703041 Amo12g2983 12 117266339 117269143 PCT
Amo12g2983 12 117266339 117269143 Amo16g0037 16 701119 703041 PCT