Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2983 ATGCATTCGGGTCATGAAGGGGATAGAGATGGATATGAATTCATCACTTATGCCAACGGTTTGGTGTGGAAACTAAAAGGGGAGAAGGAAGATCAAGGCTTTGTCATTCAAAGGAATACAAAAGGCAATAGAATTCCTCCAATGAATTTCTTCAAATCGGTATTCTCCGACGATCCTGATCCCAATCCTAATCCCTCGCCACCACAACCCTCCCCTTCCTCCTCCGCCACCACCACCGGCGCGTGGAAATTCGGCGACCTGATCAAAACCCTAAGTTCTAAATCTGAATCGATAATCGAAACCTACCGCCGCGACCTGCACGAATTCGGAACCGGACTGAAGAAGGAGATCGAGGTAGCTCACGGTTCCGTTGGCCACGTCATCGACGAGCTCGGAACCACCGTGGCGAAAGGAACGTCTCAGATCATATCCAAAAGCAAGGACGCGATCCGAGCCGTTGATAACCAATCCGATTATTCGGATCAGAAGAGAAGTGGACGCTTCTTCAGTAGACTTGATGCTGCGGTTCGTGATATTCAGGGTGATGCTGGAACTTACTGTGATGAACCTGAGGATTTGCAAGAGTTCAACGAGTGGAAATTAGGGTTTTCCATTGATGCGAAGAATGAAGAAATGGAGAGGCTTTTGAAGGAGAATGAGGCAATGGAAGGTGTTTATAAGAGTGTTGTTCCCAAAATTGTTGATCATGATGTATTGAAGAAAGATGAGGATGATGTTAGGGCTAGAATTGTGAAGGGGATGAACAAAGAAGAAGAGGATTTGAATGAAAGAGGAAGAACGAGATTGAATATGGAAGAGGTAAAGAGTTCAGGTGAGGAAGGATTGAAGACAGAGAAAAGAGAGAATTTGTTGGAAAGTAAGGAACTTGGCAAAAGGGTAGATGAGTTTGTTGAGGGATCCGGATCCGGAGGTGTTTGGAAGGTGGGTAGCGGCGATGGTGGAGTGAAGGAAACTATTGAGGAAGGAAATGTTGATGGTGTGCCAAAGTTTGAAGTGGACAATGCTGGAAGTAATAAGATTGATGAGAAAATGGTAATGGAAAGGAAGAAGGTTGATGATGTGAAATCTACAGATAAGAATGATGGAAGTAAGCACTTGTTTCATCAGGAGGAAGAAGAGGAAGAGGAACTTGGTTGGGATGAGATTGAGGATCTTAGTAGCATTGATGAAAAGAAAATAACTCAGAGTGGTAGTACAAGCATTAGTAAGATCGATTTGCGGAAGCGACTTAGTGCTGCAGAAGAAGAGGAGGAATTGAGTTGGGACATTGAAGAAGATGAGGAGCCTGCTGCTAGTGCTAAGGCCTGA 1329 0.447 MHSGHEGDRDGYEFITYANGLVWKLKGEKEDQGFVIQRNTKGNRIPPMNFFKSVFSDDPDPNPNPSPPQPSPSSSATTTGAWKFGDLIKTLSSKSESIIETYRRDLHEFGTGLKKEIEVAHGSVGHVIDELGTTVAKGTSQIISKSKDAIRAVDNQSDYSDQKRSGRFFSRLDAAVRDIQGDAGTYCDEPEDLQEFNEWKLGFSIDAKNEEMERLLKENEAMEGVYKSVVPKIVDHDVLKKDEDDVRARIVKGMNKEEEDLNERGRTRLNMEEVKSSGEEGLKTEKRENLLESKELGKRVDEFVEGSGSGGVWKVGSGDGGVKETIEEGNVDGVPKFEVDNAGSNKIDEKMVMERKKVDDVKSTDKNDGSKHLFHQEEEEEEELGWDEIEDLSSIDEKKITQSGSTSISKIDLRKRLSAAEEEEELSWDIEEDEEPAASAKA* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2983 442 Gene3D BSD domain 164 239 IPR035925 -
Amo12g2983 442 PANTHER PROTEIN, PUTATIVE-RELATED 123 434 - -
Amo12g2983 442 PANTHER PROTEIN, PUTATIVE-RELATED 48 119 - -
Amo12g2983 442 MobiDBLite consensus disorder prediction 46 79 - -
Amo12g2983 442 MobiDBLite consensus disorder prediction 306 442 - -
Amo12g2983 442 PANTHER SYNAPSE-ASSOCIATED PROTEIN 48 119 - -
Amo12g2983 442 Coils Coil 205 225 - -
Amo12g2983 442 PANTHER SYNAPSE-ASSOCIATED PROTEIN 123 434 - -
Amo12g2983 442 MobiDBLite consensus disorder prediction 398 412 - -
Amo12g2983 442 SMART wurzfinal6 199 243 IPR005607 -
Amo12g2983 442 MobiDBLite consensus disorder prediction 342 379 - -
Amo12g2983 442 SUPERFAMILY BSD domain-like 169 237 IPR035925 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2983 Amo-Chr12 117266339 117269143 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2983 - - adu:107475797 636.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0037 16 701119 703041 Amo12g2983 12 117266339 117269143 PCT
Amo12g2983 12 117266339 117269143 Amo16g0037 16 701119 703041 PCT