Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0025 ATGTTACCTCTGACTATGAGTTTGATGAGGGTGCTGGGAAGTGGGAAACTGTTCCCACCGGAACACATAGTCACCGATTCAGAGGACATACCTTTTGGAACACTGTGGTGGTTTGTGTACGCTGGAATTTCATGTTTTCTTGTCCTCTTCGCTGGGATTATGTCTGGTCTCACCCTCGGTTTGATGTCTCTTGGTCTCGTTGACCTTGAGATTCTTCAGCGTAGTGGCACTTCCACTGAGAAAAAACAAGCTGCTGCTATTTTGCCTGTTGTTAAGAAACAGCACCAGTTGCTTGTTACTTTGCTTCTGTGTAATGCCTGTGCTATGGAGGGCTGGAGAATCATAATATATGAGCTAAGTTTGACTGAGTTTTCACATGGTCAACTAGCTGCTCCTTTACTTGCACTTCCTATCTACCTTGATAAAATTTTTCATCCTGTTGTTGCTGTTATTTTATCAGTAACTTTTGTTCTAGCTTTTGGAGAGGTTATCCCTCAAGCTATATGCTCAAGATATGGACTCTATGTTGGTTCAAATTTTGTGGGACTTGTACGTGTTCTGATGATAATTTGTTTTCCAATTGCATACCCTATTGGAAAGGTTCTGGATATATTACTAGGACACAACGATGCACTGTTTCGGCGAGCGCAATTGAAAGCCCTTGTTTCAATCCATAGCCAAGAGGCTGGTAAAGGCGGTGAACTCACACACGATGAGACAACAATTATCAGTGGAGCACTTGATCTCACTGAGAAGACTGCAGAGGAGGCTATGACACCAATTGAATCTACATTTTCTTTGGATGTTGCTTCCAAATTAGACTGGGAAGCAATCGGGAAAATTCTTGCACGAGGCCATAGTCGTGTCCCTGTATACAGCGGAAACCCCAAAAATATAATTGGCCTCTTACTAGTAAAAAGTCTTCTAACTGTAAGAGCCGAAACTGAGACTCCTGTTAGTGCTGTTTCGATCCGGAGAATTCCAAGGGTTCCAGCAGATATGCCTTTATATGACATCCTAAATGAGTTTCAGAAAGGAAGTAGCCATATGGCCGCCGTAGTCAAGGTTACAAGAGATAGAAACAGCACTCAGGCTAATGGAGACACTGACAAATCTAAGGATAATGAAGTTTCCAAGCACAATTCTCAACTAACTATGCCATTGCTAGCAAAGTCTTCCGACAAATCGGAGAGTGTTGTCATCAGCATTGACAAAACTCATAAGCATGCTGCAGACAAACAATATCAACAAAATGGAACCGCAACAAACGGTGTTCACCATTTTTGTGAGAACACTGATGATGGTGAAGTTATTGGCATCATAACACTGGAGGATGTTTTCGAAGAACTCTTGCAGGAAGAAATTGTGGATGAAACTGATGTATATGTAGATGTACATAGAAGAATACGTGTAGCTGCTGTTGCAGCTGCTACATCAGTGGCGCGAGTTCCATCCGGCCGGAAGTTGACGGGGAATCAAGCAAGCAAGTGA 1491 0.4266 MLPLTMSLMRVLGSGKLFPPEHIVTDSEDIPFGTLWWFVYAGISCFLVLFAGIMSGLTLGLMSLGLVDLEILQRSGTSTEKKQAAAILPVVKKQHQLLVTLLLCNACAMEGWRIIIYELSLTEFSHGQLAAPLLALPIYLDKIFHPVVAVILSVTFVLAFGEVIPQAICSRYGLYVGSNFVGLVRVLMIICFPIAYPIGKVLDILLGHNDALFRRAQLKALVSIHSQEAGKGGELTHDETTIISGALDLTEKTAEEAMTPIESTFSLDVASKLDWEAIGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRAETETPVSAVSIRRIPRVPADMPLYDILNEFQKGSSHMAAVVKVTRDRNSTQANGDTDKSKDNEVSKHNSQLTMPLLAKSSDKSESVVISIDKTHKHAADKQYQQNGTATNGVHHFCENTDDGEVIGIITLEDVFEELLQEEIVDETDVYVDVHRRIRVAAVAAATSVARVPSGRKLTGNQASK* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0025 496 PANTHER ANCIENT CONSERVED DOMAIN PROTEIN-RELATED 130 495 IPR045095 GO:0010960
Amo16g0025 496 PANTHER ANCIENT CONSERVED DOMAIN PROTEIN-RELATED 22 115 IPR045095 GO:0010960
Amo16g0025 496 MobiDBLite consensus disorder prediction 364 378 - -
Amo16g0025 496 Pfam Cyclin M transmembrane N-terminal domain 43 238 IPR002550 -
Amo16g0025 496 Gene3D - 372 458 IPR046342 -
Amo16g0025 496 SUPERFAMILY CBS-domain pair 243 452 IPR046342 -
Amo16g0025 496 CDD CBS_pair_CorC_HlyC_assoc 253 354 IPR044751 -
Amo16g0025 496 PANTHER BNAC05G01850D PROTEIN 130 495 - -
Amo16g0025 496 PANTHER BNAC05G01850D PROTEIN 22 115 - -
Amo16g0025 496 MobiDBLite consensus disorder prediction 358 385 - -
Amo16g0025 496 Gene3D - 239 371 IPR046342 -
Amo16g0025 496 ProSiteProfiles CNNM transmembrane domain profile. 33 239 IPR002550 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0025 Amo-Chr16 446006 450017 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0025 K16302 - gmx:100777230 718.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0025 16 446006 450017 Amo16g0025 16 446006 450017 ECH
Amo16g0025 16 446006 450017 Amo06g0464 06 6466611 6470904 hybridization