Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0464 ATGTTACCTCTGACTATGAGTTTGATGAGGGTGCTGGGAAGTGGGAAACTGTTCCCACCGGAACACATAGTCACCGATTCAGAGGACATACCTTTTGGAACACTGTGGTGGTTTGTGTACGCTGGAATTTCATGTTTTCTTGTCCTCTTCGCTGGGATTATGTCTGGTCTCACCCTCGGTTTGATGTCTCTTGGTCTCGTTGACCTTGAGATTCTTCAGCGTAGTGGCACTTCCACTGAGAAAAAACAAGCTGCTGCTATTTTGCCTGTTGTTAAGAAACAGCACCAGTTGCTTGTTACTTTGCTTCTGTGTAATGCCTGTGCTATGGAGGCACTTCCTATCTACCTTGATAAAATTTTTCATCCTGTTGTTGCTGTTATTTTATCAGTAACTTTTGTTCTAGCTTTTGGAGAGGTTATCCCTCAAGCTATATGCTCAAGATATGGACTCTATGTTGGTTCAAATTTTGTGGGACTTGTACGTGTTCTGATGATAATTTGTTTTCCAATTGCATACCCTATTGGAAAGGTTCTGGATATATTACTAGGACACAACGATGCACTGTTTCGGCGAGCGCAATTGAAAGCCCTTGTTTCAATCCATAGCCAAGAGGCTGGTAAAGGCGGTGAACTCACACACGATGAGACAACAATTATCAGTGGAGCACTTGATCTCACTGAGAAGACTGCAGAGGAGGCTATGACACCAATTGAATCTACATTTTCTTTGGATGTTGCTTCCAAATTAGACTGGGAAGCAATCGGGAAAATTCTTGCACGAGGCCATAGTCGTGTCCCTGTATACAGCGGAAACCCCAAAAATATAATTGGCCTCTTACTAGTAAAAAGTCTTCTAACTGTAAGAGCCGAAACTGAGACTCCTGTTAGTGCTGTTTCGATCCGGAGAATTCCAAGGGTTCCAGCAGATATGCCTTTATATGACATCCTAAATGAGTTTCAGAAAGGAAGTAGCCATATGGCCGCCGTAGTCAAGGTTACAAGAGATAGAAACAGCACTCAGGCTAATGGAGACACTGACAAATCTAAGGATAATGAAGTTTCCAAGCACAATTCTCAACTAACTATGCCATTGCTAGCAAAGTCTTCCGACAAATCGGAGAGTGTTGTCATCAGCATTGACAAAACTCATAAGCATGCTGCAGACAAACAATATCAACAAAATGGAACCGCAACAAACGGTGTTCACCATTTTTGTGAGAACACTGATGATGGTGAAGTTATTGGCATCATAACACTGGAGGATGTTTTCGAAGAACTCTTGCAGGAAGAAATCGTGGATGAAACTGATGTATATGTAGATGTACATAGAAGAATACGTGTAGCTGCTGTTGCAGCTGCTACATCAGTGGCGCGAGTTCCATCTGGCCGGAAGTTGACAGTTCACAAGCCTGTAGGGAATCAAGCAAGCAAGTGA 1434 0.4282 MLPLTMSLMRVLGSGKLFPPEHIVTDSEDIPFGTLWWFVYAGISCFLVLFAGIMSGLTLGLMSLGLVDLEILQRSGTSTEKKQAAAILPVVKKQHQLLVTLLLCNACAMEALPIYLDKIFHPVVAVILSVTFVLAFGEVIPQAICSRYGLYVGSNFVGLVRVLMIICFPIAYPIGKVLDILLGHNDALFRRAQLKALVSIHSQEAGKGGELTHDETTIISGALDLTEKTAEEAMTPIESTFSLDVASKLDWEAIGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRAETETPVSAVSIRRIPRVPADMPLYDILNEFQKGSSHMAAVVKVTRDRNSTQANGDTDKSKDNEVSKHNSQLTMPLLAKSSDKSESVVISIDKTHKHAADKQYQQNGTATNGVHHFCENTDDGEVIGIITLEDVFEELLQEEIVDETDVYVDVHRRIRVAAVAAATSVARVPSGRKLTVHKPVGNQASK* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0464 477 MobiDBLite consensus disorder prediction 340 354 - -
Amo06g0464 477 PANTHER BNAC05G01850D PROTEIN 22 472 - -
Amo06g0464 477 SUPERFAMILY CBS-domain pair 219 428 IPR046342 -
Amo06g0464 477 Gene3D - 215 347 IPR046342 -
Amo06g0464 477 MobiDBLite consensus disorder prediction 334 361 - -
Amo06g0464 477 CDD CBS_pair_CorC_HlyC_assoc 229 330 IPR044751 -
Amo06g0464 477 Gene3D - 348 434 IPR046342 -
Amo06g0464 477 ProSiteProfiles CNNM transmembrane domain profile. 33 215 IPR002550 -
Amo06g0464 477 PANTHER ANCIENT CONSERVED DOMAIN PROTEIN-RELATED 22 472 IPR045095 GO:0010960
Amo06g0464 477 Pfam Cyclin M transmembrane N-terminal domain 43 214 IPR002550 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0464 Amo-Chr6 6466611 6470904 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0464 K16302 - gmx:100777230 741.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0025 16 446006 450017 Amo06g0464 06 6466611 6470904 hybridization