Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0012 ATGTCAGTTGCACCGGTTGAGAGCATCCCCTCTTTAAGTAGTGACCTCTTCTATGAAATACTGCGAAGGCTTGATGGCGCGACATTGGCAAGCGCAGCATGCACCTGTGCTGCACTTTGCTCCATCTCAAAAGAAGAGAGTTTATGGGAAAATGTATGCTCATCTATGTGGCCTTCAACCAATAGGGAAGATGTCAAAAGTTTAATCTCTTCTGTTGGTGGATTCAGAAAATTCTATGCAGACAGTTTTCCACTTATTGTGAACAAGGATGTTATGGAGTTTCATCACAACAACTACTTTGAGTACCCTGATGATTGGACCGAAGCCGAATATTATGGTGATGTGATTGAATCAGAGAGCATCTCACCATCTAACTTTGTTTCTATTGTAGATATTAGGTTCAAGGAGAAACCAATCTGTTCCAAAGTTCTGTTGGGTATTCCAAATGCAAATGGCTATGATGATTGGTTCTATAACTGCCCTTTTCAGATTGATATTCTTACTTATGCAGATAGCGAAGGCAACAACGATGGCGCCGTGAATCTTTCCATTTCTGATGGTCTGCCAGCAATTACATCCATGGAAAGGGAAAAGAAAGATGGGAAGCTTTGGAAGGAGCTTAGCAATGGACTCAGGCTTAGTTGGATTGTAGTAAACAGAAAAATCAAGCAAGCTGCAAATCTTTCTAGTTGGTTTCCTCTTGGTGGCCAAAGGCATTGGCCAACAGATAATGATTTTGTAGTCCGGTTCGGATCGATTCTCCCGGCCGAGGAAATTCTTCCTTGCCAAGTAGTGGAGTGCATCCTTATCATGAAGTTTAGAGTTGTCCACACAGAATCAGAGGGGATTCAAACTAGTCTTAAGTTAACTGAATTGAGCATGCAATTGGAAGACATGGAAGGTGCTCATGTTAATGGAAGGAACAGTTTGCATATTCTTAAGAAAGCACTTAGTTGCCAAAGGAGCAAAAACTATGGTGATGCACTTGAGTCTTGTCACATGTATTCAAAGGTGCAGAATGAGTTGAAGAAGGAAAAGATGAGAAATGAAAATAGGTTGGATAGGCTTTGTATTTTGAGTGGCATTGCTGCTTTTATGACATTCTGGTACTGTGTCCTGTGA 1122 0.4127 MSVAPVESIPSLSSDLFYEILRRLDGATLASAACTCAALCSISKEESLWENVCSSMWPSTNREDVKSLISSVGGFRKFYADSFPLIVNKDVMEFHHNNYFEYPDDWTEAEYYGDVIESESISPSNFVSIVDIRFKEKPICSKVLLGIPNANGYDDWFYNCPFQIDILTYADSEGNNDGAVNLSISDGLPAITSMEREKKDGKLWKELSNGLRLSWIVVNRKIKQAANLSSWFPLGGQRHWPTDNDFVVRFGSILPAEEILPCQVVECILIMKFRVVHTESEGIQTSLKLTELSMQLEDMEGAHVNGRNSLHILKKALSCQRSKNYGDALESCHMYSKVQNELKKEKMRNENRLDRLCILSGIAAFMTFWYCVL* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0012 373 SUPERFAMILY F-box domain 6 101 IPR036047 GO:0005515
Amo16g0012 373 PANTHER F-BOX PROTEIN-RELATED 4 369 IPR045283 -
Amo16g0012 373 PANTHER F-BOX PROTEIN-RELATED 4 369 - -
Amo16g0012 373 Gene3D - 3 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0012 Amo-Chr16 330015 332628 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0012 - - gmx:100500689 658.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0012 16 330015 332628 Amo16g0012 16 330015 332628 ECH
Amo16g0012 16 330015 332628 Amo06g0489 06 6833209 6835368 hybridization