Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0489 ATGACTTGTGTTGTTCTTAGTGTTATCGCCATGTCAGTTGCACCGGTTGAGAGCATCCCCTCTTTAAGTAGTGACCTCTTCTATGAAATACTGCGAAGGCTTGATGGCGCGACATTGGCAAGCGCAGCATGCACCTGTGCTGCACTTTGCTCCATCTCAAAAGAAGAGAGTTTATGGGAAAATGTATGCTCATCTATGTGGCCTTCAACCAATAGGGAAGATGTCAAAAGTTTAATCTCTTCTGTTGGTGGATTCAGAAAATTCTATGCAGACAGTTTTCCACTTATTGTGAACAAGGATGTTATGGAGTTTCATCACAACAACTACTTTGAGTACCCTGATGATTGGACCGAAGCCGAATATTATGGTGATGTGATTGAATCAGAGAGCATCTCACCATCTAACTTTGTTTCTATTGTAGATATTAGGTTCAAGGAGAAACCAATCTGTTCCAAAGTTCTGTTGGGTATTCCAAATGCAAATGGCTATGATGATTGGTTCTATAACTGCCCTTTTCAGATTGATATTCTTACTTATGCAGATAGCGAAGGCAACAACGATGGCGCCGTGAATCTTTCCATTTCTGATGGTCTGCCAGCAATTACATCCATGGAAAGGGAAAAGAAAGATGGGAAGCTTTGGAAGGAGCTTAGCAATGGACTCAGGCTTAGTTGGATTGTAGTAAACAGAAAAATCAAGCAAGCTGCAAATCTTTCTAGTTGGTTTCCTCTTGGTGGCCAAAGGCATTGGCCAACAGATAATGATTTTGTAGTCCGGTTCGGATCGATTCTCCCGGCCGAGGAAATTCTTCCTTGCCAAGTAGTGGAGTGCATCCTTATCATGAAGTTTAGAGTTGTCCACACAGAATCAGAGGGGATTCAAACTAGTCTTAAGTTAACTGAATTGAGCATGCAATTGGAAGACATGGAAGGTGCTCATGTTAATGGAAGYAACAGTTTGCATATTCTTAAGAAAGCACTTAGTTGCCAAAGGAGCAAAAACTATGGTGATGCACTTGAGTCTTGTCACATGTATTCAAAGGTGCAGAATGAGTTGAAGAAGGAAAAGATGAGAAATGAAAATAGGTTGGATAGGCTTTGTATTRTGAGTGGCATTGCTGCTTTTATGACATTCTGGTACTGTGTCCTGTGA 1152 0.4115 MTCVVLSVIAMSVAPVESIPSLSSDLFYEILRRLDGATLASAACTCAALCSISKEESLWENVCSSMWPSTNREDVKSLISSVGGFRKFYADSFPLIVNKDVMEFHHNNYFEYPDDWTEAEYYGDVIESESISPSNFVSIVDIRFKEKPICSKVLLGIPNANGYDDWFYNCPFQIDILTYADSEGNNDGAVNLSISDGLPAITSMEREKKDGKLWKELSNGLRLSWIVVNRKIKQAANLSSWFPLGGQRHWPTDNDFVVRFGSILPAEEILPCQVVECILIMKFRVVHTESEGIQTSLKLTELSMQLEDMEGAHVNGSNSLHILKKALSCQRSKNYGDALESCHMYSKVQNELKKEKMRNENRLDRLCIXSGIAAFMTFWYCVL* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0489 383 PANTHER F-BOX PROTEIN-RELATED 14 379 - -
Amo06g0489 383 PANTHER F-BOX PROTEIN-RELATED 14 379 IPR045283 -
Amo06g0489 383 Gene3D - 7 104 - -
Amo06g0489 383 SUPERFAMILY F-box domain 16 111 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0489 Amo-Chr6 6833209 6835368 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0489 - - gmx:100500689 654.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0012 16 330015 332628 Amo06g0489 06 6833209 6835368 hybridization