Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0011 ATGTTAATGTTCACCACAAAACCCACCGATATGAGCAAGCCTTCAACTGAAACACCCAACACCCACTGCGATTTACTCACCAAGTTCAAGCGTTTCAAGCCTCTAGAACCTTCTCTTGGCATCGCTAGCTTCTTCTTGCTCACCCTCCTTGTCTTCCTCTCCTGCTTCTTCTACCTCGATTACAGAGGCTTACGCTCTTGGGGAACTACGCTTCTCGGTCTCCACCTCCCTTCTTCTTCTTCTTCCTCTTCTTCCGCTGCTCCTCCACTGGTTCAGTTTCTCTCCAAAGAGGGCGATCAATGCAATGTTTATGATGGTAACTGGGTTTGGGATGAGTCCTACCCTCTCTACCACTCTGCCAATTGCTCCTTCCTTGATCAAGGTTTTCGTTGCTTTGAGAATGGAAGACCTGATTCCTTCTACACCAAATGGCGATGGCACCCCAAAGCTTGCAACTTGCCCAGATTTGATGCAACAAAGATGTTGGAAACTCTACGCGATAAGCGGCTAGTTTTCGTTGGAGATTCAATTGGAAGGAACCAATGGGAATCGCTTCTTTGCATGCTTTCTTCTGCCGTGGCAAACAAGAGTAAAATCTATGAAGTTAATGGGAGCCCAATCACAAAGCATACAGGCTTCTTGTCGTTTATGTTTGAAGATTACAACTGCACGGTTGAGTACTACAGATCGACGTATCTGGTCGTGCAGGGACATCCTCCTCCAGGAGCACCTGAAGGGGTGAGATTGACTTTGAGACTGGATCATATGGACTGGACTGCTCATCGGTGGAGAGATGCAGATGTGTTGATTTTCAATACCGGACATTGGTGGAACTATGAGAAGACTATTAAAATGGGTTGTTACTTCCAAATAGGAGAGGAAGTGAACATGAATTTGACCATAACGGATGCGTTCAGAATATCGGTGGAGACGATGATTGATTGGATTGCCAGAGAAGTAAACATGAACAAATCTTATGTCCTCTTCCGAACTTATTCTCCTGTGCATTTCAGGGGTGGTGATTGGAACACCGGTGGTGGTTGTAACTCGGAAACACTGCCTGATTTAGGCTCATTGCCAGCAGTATCTGACAGTCATTCAAGAACCATTGTTGATGTCTTGTCAGAGCACGCCGGGGAACCGGTAGTTATGAATTTGGACCTGCTGAACATCACGCAGATGTCGGCAAGCAGAAAAGACGGCCATGCATCTGTTTACCATATCGGGCCAGACCGAAGGGCCCCTATGCAGCTGCAAGATTGTAGCCATTGGTGTTTGCCCGGTGTTCCTGATTCTTGGAATGAGATTCTCTATGCACTTCTTCTCAAGAGGAATGCACCAAAATTTTCCCAAGTTTCACTATAA 1365 0.463 MLMFTTKPTDMSKPSTETPNTHCDLLTKFKRFKPLEPSLGIASFFLLTLLVFLSCFFYLDYRGLRSWGTTLLGLHLPSSSSSSSSAAPPLVQFLSKEGDQCNVYDGNWVWDESYPLYHSANCSFLDQGFRCFENGRPDSFYTKWRWHPKACNLPRFDATKMLETLRDKRLVFVGDSIGRNQWESLLCMLSSAVANKSKIYEVNGSPITKHTGFLSFMFEDYNCTVEYYRSTYLVVQGHPPPGAPEGVRLTLRLDHMDWTAHRWRDADVLIFNTGHWWNYEKTIKMGCYFQIGEEVNMNLTITDAFRISVETMIDWIAREVNMNKSYVLFRTYSPVHFRGGDWNTGGGCNSETLPDLGSLPAVSDSHSRTIVDVLSEHAGEPVVMNLDLLNITQMSASRKDGHASVYHIGPDRRAPMQLQDCSHWCLPGVPDSWNEILYALLLKRNAPKFSQVSL* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0011 454 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 28 446 - -
Amo16g0011 454 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 153 439 IPR026057 GO:0016740
Amo16g0011 454 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 28 446 IPR029962 GO:0016413
Amo16g0011 454 Pfam PMR5 N terminal Domain 100 152 IPR025846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0011 Amo-Chr16 317782 321203 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0011 - - gmx:100801125 705.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0011 16 317782 321203 Amo16g0011 16 317782 321203 ECH
Amo16g0011 16 317782 321203 Amo06g0490 06 6844214 6847583 hybridization